BARCHAN: Blob Alignment for Robust CHromatographic ANalysis

@article{Couprie2017BARCHANBA,
  title={BARCHAN: Blob Alignment for Robust CHromatographic ANalysis},
  author={Camille Couprie and Laurent Duval and Maxime Moreaud and Sophie H{\'e}non and M{\'e}linda Tebib and Vincent Souchon},
  journal={Journal of chromatography. A},
  year={2017},
  volume={1484},
  pages={
          65-72
        }
}
View on PubMed
arxiv.org
8 Citations
Background Citations
2
Methods Citations
1

Figures and Tables from this paper

8 Citations

Citation Type

Citation Type

Chromatographic fingerprinting by comprehensive two-dimensional chromatography: Fundamentals and tools
Advanced data handling in comprehensive two-dimensional gas chromatography
Peak alignment of gas chromatography-mass spectrometry data with deep learning.
Gas chromatography vacuum ultraviolet spectroscopy: A review.
TLDR
The purpose of this article is to provide an overview of the features and specificities of GC-Vacuum Ultraviolet spectroscopy coupling which has gained interest since the recent introduction of a commercial Vacuum Ult ultraviolet detector.
Pixel-by-pixel correction of retention time shifts in chromatograms from comprehensive two-dimensional gas chromatography coupled to high resolution time-of-flight mass spectrometry.
Data mining/machine learning methods in foodomics
Pedestrians' Detection Methods in Video Images: A Literature Review
  • Juan Antonio, Marcelo Romero
  • Computer Science
    2018 International Conference on Computational Science and Computational Intelligence (CSCI)
  • 2018
TLDR
Current algorithms for pedestrian detection using image processing are reviewed, where used images have been obtained from video surveillance or conventional cameras, and a variety of novel algorithms are studied.
Quantitative Analysis of Hydrocarbons in Gas Oils by Two-Dimensional Comprehensive Gas Chromatography with Vacuum Ultraviolet Detection

References

SHOWING 1-10 OF 52 REFERENCES
Robust algorithm for aligning two-dimensional chromatograms.
TLDR
A new algorithm for aligning whole GC × GC chromatograms achieves the best matches of retention times for test analytes, avoids some artifacts which result from the other alignment algorithms, and incurs the least modification of quantitative signal information.
Alignment and clustering strategies for GC×GC-MS features using a cylindrical mapping.
DISCO2: A Comprehensive Peak Alignment Algorithm for Two-Dimensional Gas Chromatography Time-of-Flight Mass Spectrometry
TLDR
A novel two-stage peak alignment algorithm, DISCO2, was developed for analysis of comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry data using a mixture similarity measure to determine whether two peaks were generated by the same type of compound in different experiments.
Alignment for comprehensive two-dimensional gas chromatography with dual secondary columns and detectors.
TLDR
Experimental results for GC × 2GC with FID and MS for metabolomic analyses of human urine samples suggest that low-degree polynomial mapping functions out-perform affine transformation and achieve performance near a lower-bound benchmark of inherent variability.
A comprehensive two-dimensional retention time alignment algorithm to enhance chemometric analysis of comprehensive two-dimensional separation data.
TLDR
Classification by principal component analysis (PCA) substantially improved, resulting in 100% accurate scores clustering by applying comprehensive 2D retention time alignment to all three data sets.
Smith-Waterman peak alignment for comprehensive two-dimensional gas chromatography-mass spectrometry
TLDR
The proposed Smith-Waterman local alignment-based algorithms are capable of aligning both the homogeneous and heterogeneous data of multiple GC × GC-MS experiments without the transformation of retention times and the selection of landmark peaks.
An automatic peak finding method for LC-MS data using Gaussian second derivative filtering.
TLDR
The procedure for localising and characterising peaks in the chromatographic time domain of LC-MS data has been developed and showed an excellent agreement with the analytical signals of the raw data, and also a clearly improved visualisation in total ion- and base-peak chromatograms.
Two-dimensional semi-parametric alignment of chromatograms.
Smart templates for peak pattern matching with comprehensive two-dimensional liquid chromatography.
Comparative visualization for comprehensive two-dimensional gas chromatography.
...
...