Automated processing of zebrafish imaging data: a survey.

  title={Automated processing of zebrafish imaging data: a survey.},
  author={Ralf Mikut and Thomas Dickmeis and Wolfgang Driever and Pierre Geurts and Fred A. Hamprecht and Bernhard X. Kausler and Mar{\'i}a J. Ledesma-Carbayo and Rapha{\"e}l Mar{\'e}e and Karol Mikula and Periklis Pantazis and Olaf Ronneberger and Andr{\'e}s Santos and Rainer Stotzka and Uwe Str{\"a}hle and Nadine Peyri{\'e}ras},
  volume={10 3},
Due to the relative transparency of its embryos and larvae, the zebrafish is an ideal model organism for bioimaging approaches in vertebrates. Novel microscope technologies allow the imaging of developmental processes in unprecedented detail, and they enable the use of complex image-based read-outs for high-throughput/high-content screening. Such applications can easily generate Terabytes of image data, the handling and analysis of which becomes a major bottleneck in extracting the targeted… 

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