Analysis of synonymous codon usage in porcine reproductive and respiratory syndrome virus

@article{Liu2010AnalysisOS,
  title={Analysis of synonymous codon usage in porcine reproductive and respiratory syndrome virus},
  author={Y. Liu and J. Zhou and Hao-tai Chen and L. Ma and Yao-zhong Ding and M. Wang and J. Zhang},
  journal={Infection, Genetics and Evolution},
  year={2010},
  volume={10},
  pages={797 - 803}
}
  • Y. Liu, J. Zhou, +4 authors J. Zhang
  • Published 2010
  • Biology, Medicine
  • Infection, Genetics and Evolution
  • Abstract In this study, we calculated the relative synonymous codon usage (RSCU) values and codon usage bias (CUB) values to implement a comparative analysis of codon usage pattern of open reading frames (ORFs) which belong to the two main genotypes of porcine reproductive and respiratory syndrome virus (PRRSV). By analysis of synonymous codon usage values in each ORF of PRRSV, the optimal codons for most amino acids were all C or G-ended codons except GAU for Asp, CAU for His, UUU for Phe… CONTINUE READING
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