Analysis of amino acid indices and mutation matrices for sequence comparison and structure prediction of proteins.

@article{Tomii1996AnalysisOA,
  title={Analysis of amino acid indices and mutation matrices for sequence comparison and structure prediction of proteins.},
  author={Kenji Tomii and Minoru Kanehisa},
  journal={Protein engineering},
  year={1996},
  volume={9 1},
  pages={27-36}
}
An amino acid index is a set of 20 numerical values representing any of the different physicochemical and biochemical properties of amino acids. As a follow-up to the previous study, we have increased the size of the database, which currently contains 402 published indices, and re-performed the single-linkage cluster analysis. The results basically confirmed the previous findings. Another important feature of amino acids that can be represented numerically is the similarity between them. Thus… CONTINUE READING
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