An introduction to effective use of enrichment analysis software

@inproceedings{Tipney2010AnIT,
  title={An introduction to effective use of enrichment analysis software},
  author={Hannah J. Tipney and Lawrence E. Hunter},
  booktitle={Human Genomics},
  year={2010}
}
In recent years, there has been an explosion in the range of software available for annotation enrichment analysis. Three classes of enrichment algorithms and their associated software implementations are introduced here. Their limitations and caveats are discussed, and direction for tool selection is given.