Active Matter Clusters at Interfaces
@article{Copenhagen2016ActiveMC, title={Active Matter Clusters at Interfaces}, author={Katherine Copenhagen and Ajay Gopinathan}, journal={arXiv: Biological Physics}, year={2016} }
Collective and directed motility or swarming is an emergent phenomenon displayed by many self-organized assemblies of active biological matter such as clusters of embryonic cells during tissue development, cancerous cells during tumor formation and metastasis, colonies of bacteria in a biofilm, or even flocks of birds and schools of fish at the macro-scale. Such clusters typically encounter very heterogeneous environments. What happens when a cluster encounters an interface between two…
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Frustration-induced phases in migrating cell clusters
- 2018
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Science Advances
An agent-based model is developed in which the cells form a cohesive cluster due to attractive and alignment interactions, and it is found that when cells at the cluster rim are more motile, all three phases of motion coexist, in agreement with observations.
Cell cluster migration: Connecting experiments with physical models.
- 2018
Biology
Seminars in cell & developmental biology
44 References
Topologically induced swarming phase transition on a 2D percolated lattice
- 2015
Physics
Physical biology
There is a finite range of topological disorder where swarming can occur and that this range can be maximized by an optimal amount of mutual repulsion, and it is found that the swarming transition does not exist in the large system size limit, while the addition of a mutually repulsive interaction can restore the existence of the transition at a finite critical value of disorder.
Guidance of collective cell migration by substrate geometry.
- 2013
Biology
Integrative biology : quantitative biosciences from nano to macro
The results show that the geometrical confinement of cells into well-defined circles induces a persistent, coordinated and synchronized rotation of cells that depends on cell density, which is strongly altered in cells that present a downregulation of adherens junctions and in cancerous cell types.
Motility of Escherichia coli cells in clusters formed by chemotactic aggregation
- 2003
Biology
Proceedings of the National Academy of Sciences of the United States of America
A simulation based on a model of the sensory memory of E. coli reproduces the experimental data and indicates that the tumble rate and consequently the morphology of the cluster are determined by the sensoryMemory of cells.
Collective motion of cells: from experiments to models.
- 2014
Biology
Integrative biology : quantitative biosciences from nano to macro
This review presents the related experimental observations and treat them in light of a few basic computational models so as to make an interpretation of the phenomena at a quantitative level as well.
Phase transition in the collective migration of tissue cells: experiment and model.
- 2006
Biology
Physical review. E, Statistical, nonlinear, and soft matter physics
A flocking model is constructed that exhibits a continuous transition to the ordered phase, while assuming only short-range interactions and no explicit information about the knowledge of the directions of motion of neighbors.
Emergent dynamics of laboratory insect swarms
- 2013
Biology
Scientific reports
Three-dimensional, time-resolved measurements of the positions, velocities and accelerations of individual insects in laboratory swarms of the midge Chironomus riparius show that the swarms display an effective large-scale potential that keeps individuals bound together and characterize the shape of this potential.
Hydrodynamics of soft active matter
- 2013
Biology
This review summarizes theoretical progress in the field of active matter, placing it in the context of recent experiments, and highlights the experimental relevance of various semimicroscopic derivations of the continuum theory for describing bacterial swarms and suspensions, the cytoskeleton of living cells, and vibrated granular material.
Gregarious vs Individualistic Behavior in Vicsek Swarms and the Onset of First-Order Phase Transitions
- 2013
Physics
The Standard Vicsek Model (SVM) is a minimal nonequilibrium model of selfpropelled particles that appears to capture the essential ingredients of critical flocking phenomena. In the SVM, particles…
Optimal noise maximizes collective motion in heterogeneous media.
- 2013
Physics
Physical review letters
It is shown that while at low obstacle densities the system exhibits long-range order, in strongly heterogeneous media collective motion is quasi-long-range and exists only for noise values in between two critical values, with the system being disordered at both large and low noise amplitudes.