AceView: a comprehensive cDNA-supported gene and transcripts annotation

@article{ThierryMieg2006AceViewAC,
  title={AceView: a comprehensive cDNA-supported gene and transcripts annotation},
  author={Danielle Thierry-Mieg and Jean Thierry-Mieg},
  journal={Genome Biology},
  year={2006},
  volume={7},
  pages={S12 - S12}
}
Regions covering one percent of the genome, selected by ENCODE for extensive analysis, were annotated by the HAVANA/Gencode group with high quality transcripts, thus defining a benchmark. The ENCODE Genome Annotation Assessment Project (EGASP) competition aimed at reproducing Gencode and finding new genes. The organizers evaluated the protein predictions in depth. We present a complementary analysis of the mRNAs, including alternative transcript variants. We evaluate 25 gene tracks from the… CONTINUE READING
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