ALLMAPS: robust scaffold ordering based on multiple maps

  title={ALLMAPS: robust scaffold ordering based on multiple maps},
  author={Haibao Tang and Xingtan Zhang and Chenyong Miao and Jisen Zhang and Ray Ming and James C. Schnable and Patrick S. Schnable and Eric Lyons and Jianguo Lu},
  booktitle={Genome Biology},
The ordering and orientation of genomic scaffolds to reconstruct chromosomes is an essential step during de novo genome assembly. Because this process utilizes various mapping techniques that each provides an independent line of evidence, a combination of multiple maps can improve the accuracy of the resulting chromosomal assemblies. We present ALLMAPS, a… CONTINUE READING