Corpus ID: 226289718

A step towards neural genome assembly

  title={A step towards neural genome assembly},
  author={Lovro Vrvcek and Petar Velivckovi'c and Mile vSiki'c},
De novo genome assembly focuses on finding connections between a vast amount of short sequences in order to reconstruct the original genome. The central problem of genome assembly could be described as finding a Hamiltonian path through a large directed graph with a constraint that an unknown number of nodes and edges should be avoided. However, due to local structures in the graph and biological features, the problem can be reduced to graph simplification, which includes removal of redundant… Expand
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