A restriction-site-associated DNA (RAD) linkage map, comparative genomics and identification of QTL for histological fibre content coincident with those for retted bast fibre yield and its major components in jute (Corchorus olitorius L., Malvaceae s. l.)

@article{Kundu2015ARD,
  title={A restriction-site-associated DNA (RAD) linkage map, comparative genomics and identification of QTL for histological fibre content coincident with those for retted bast fibre yield and its major components in jute (Corchorus olitorius L., Malvaceae s. l.)},
  author={Avijit Kundu and Avrajit Chakraborty and Nur Alam Mandal and Debajeet Das and Pran Gobinda Karmakar and Nagendra Kumar Singh and Debabrata Sarkar},
  journal={Molecular Breeding},
  year={2015},
  volume={35},
  pages={1-17}
}
We used RAD (restriction-site-associated DNA) sequencing to detect genome-wide SNPs and construct a dense linkage map using an intercross F2 population in jute (Corchorus olitorius). The linkage map comprising a total of 503 RAD markers in seven linkage groups spanned 358.5 cM with an average marker interval of 0.72 cM and covered 87.0 % of the genome. Genome-wide segregation distortion of the mapped loci (34.4 %) was non-random across the linkage map, with a directional bias mostly towards the… CONTINUE READING
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