A novel methodology for large-scale phylogeny partition.

@article{Prosperi2011ANM,
  title={A novel methodology for large-scale phylogeny partition.},
  author={Mattia C. F. Prosperi and Massimo Ciccozzi and Iuri Fanti and Francesco Saladini and Monica Pecorari and Vanni Borghi and Simona Di Giambenedetto and Bianca Bruzzone and Amedeo Ferdinando Capetti and Angela Vivarelli and Stefano Rusconi and Maria Carla Re and Maria Rita Gismondo and Laura Sighinolfi and Rebecca R. Gray and Marco Salemi and Maurizio Zazzi and Andrea De Luca},
  journal={Nature communications},
  year={2011},
  volume={2},
  pages={
          321
        }
}
Understanding the determinants of virus transmission is a fundamental step for effective design of screening and intervention strategies to control viral epidemics. Phylogenetic analysis can be a valid approach for the identification of transmission chains, and very-large data sets can be analysed through parallel computation. Here we propose and validate a new methodology for the partition of large-scale phylogenies and the inference of transmission clusters. This approach, on the basis of a… CONTINUE READING
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