A new dynamical domain decomposition method for parallel molecular dynamics simulation

  title={A new dynamical domain decomposition method for parallel molecular dynamics simulation},
  author={Vasilii Zhakhovskii and Katsunobu Nishihara and Yuko Fukuda and Shinji Shimojo},
  journal={CCGrid 2005. IEEE International Symposium on Cluster Computing and the Grid, 2005.},
  pages={848-854 Vol. 2}
A new material particle dynamical domain decomposition method MPD/sup 3/ has been developed. The method is suitable for a large scale parallel molecular dynamic simulation on a heterogeneous computing net. Performance of the MPD/sup 3/ algorithm is tested in various computing environments, such as PC clusters, super computer clusters, and grid. It is shown that the MPD/sup 3/ algorithm is highly-adaptive for both computer clusters and grid computing environments, even if other programs are… CONTINUE READING


Publications referenced by this paper.
Showing 1-7 of 7 references

and Yu

S. I. Anisimov, V. V. Zhakhovskii, N. A. Inogamov, K. Nishihara, A. M. Oparin
V. Petrov, "Destruction of a Solid Film under the Action of Ultrashort Laser Pulse", JETP Lett., Nauka/Interperiodica, Moscow • 2003
View 7 Excerpts
Highly Influenced

Molecular Dynamics-Simulation on Stability of Converging Shocks

V. Zhakhovskii, K. Nishihara, M. Abe
Inertial Fusion Science and Applications, IFSA 2001, Elsevier, Paris • 2002
View 1 Excerpt

Similar Papers

Loading similar papers…