A Domain Specific Data Management Architecture for Protein Structure Data

@article{Wang2006ADS,
  title={A Domain Specific Data Management Architecture for Protein Structure Data},
  author={Yanhua Wang and Rajshekhar Sunderraman and Haibo Tian},
  journal={2006 International Conference of the IEEE Engineering in Medicine and Biology Society},
  year={2006},
  pages={5751-5754}
}
In this paper, we propose an architecture that extends the Object-Oriented Database (OODB) system architecture by adding domain specific additional layers to manage protein structure data. The two layers introduced above OODB are Protein-QL, domain-specific query language and Protein-OODB, a domain-specific data layer. This architecture is designed specifically for the protein domain, but it is the first step in building a general Bio-OODBMS for biological applications. Three internal data… CONTINUE READING

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