Development and validation of SSR markers for the plant-parasitic nematode Subanguina moxae using genome assembly of Illumina pair-end reads
To investigate the genetic diversity of S. moxae, simple sequence repeat (SSR) markers are developed using Illumina short reads of the genomic DNA and will be a useful tool for understanding the population structure and transmission patterns of this parasitic nematode.
SHOWING 1-9 OF 9 REFERENCES
Tylenchida: parasites of plants and insects.
This expanded edition of the tylenchida is a reference work on the important group of nematodes and should be a resource for plant nematologists and plant pathologists.
On a new species of Shoot gall Nematode (Tylenchidae : Anguina) found from the galls on the leaves of Moxa (Artemisia saiatica Nakai)
First Report of Subanguina moxae Infecting Mugwort in Yunnan, China.
- Biology, MedicinePlant disease
In August 2011, a field of mugwort in Kunming, Yunnan Province, China, exhibited more than 90% incidence of whitish and rounded galls on the leaves, impacting the quality of the leaves for medicinal use and identifying the parasitic nematode as Subanguina moxae.
PCR-RFLP and sequencing analysis of ribosomal DNA of Bursaphelenchus nematodes related to pine wilt disease
La reaction en chaine des polymerases/polymorphisme des fragments de restriction (PCR-RFLP) a ete utilisee pour separer des isolats du nematode Bursaphelenchus, ganant 98 differences (substitutions nucleotidiques ou separations) dans les 884 paires de bases examinees.
Intraspecific rDNA restriction fragment length polymorphism in the Xiphinema americanum group.
Xiphinema americanum sensu lato, parasite de plantes et vecteur de nepovirus est present dans nombre de regions d'Amerique du Nord. Il existe dans les differentes populations une variabilite…
Evolution of the gall-forming plant parasitic nematodes (Tylenchida: Anguinidae) and their relationships with hosts as inferred from Internal Transcribed Spacer sequences of nuclear ribosomal DNA.
- BiologyMolecular phylogenetics and evolution
Multiple Sequence Alignment Using ClustalW and ClustalX
- Computer ScienceCurrent protocols in bioinformatics
The protocols in this unit discuss how to use ClustalX and ClUSTalW to construct an alignment, and create profile alignments by merging existing alignments.
The rDNA Internal Transcribed Spacer Region as a Taxonomic Marker for Nematodes.
- BiologyJournal of nematology
IT heterogeneity in individuals and populations was identified in several nematode taxa and PCR-RFLP of ITS1 is advocated as a method of taxonomic analysis in genera such as Helicotylenchus that contain numerous species with few diagnostic morphological characteristics.
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
- BiologyBriefings Bioinform.
The motivation, design principles and priorities that have shaped the development of MEGA are discussed and how MEGA might evolve in the future to assist researchers in their growing need to analyze large data set using new computational methods are discussed.