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Addressing recent docking challenges: A hybrid strategy to integrate template‐based and free protein‐protein docking
Protein–protein docking is an important computational tool for predicting protein–protein interactions. With the rapid development of proteomics projects, more and more experimental bindingExpand
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Determination of an effective scoring function for RNA–RNA interactions with a physics-based double-iterative method
Abstract RNA–RNA interactions play fundamental roles in gene and cell regulation. Therefore, accurate prediction of RNA–RNA interactions is critical to determine their complex structures andExpand
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PepBDB: a comprehensive structural database of biological peptide-protein interactions
TLDR
We have developed PepBDB-a curated Peptide Binding DataBase of biological complex structures from the Protein Data Bank (PDB). Expand
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Topology-independent and global protein structure alignment through an FFT-based algorithm
TLDR
We have developed an accurate topology-independent and global structure alignment method through an FFT-based exhaustive search algorithm, which is referred to as FTAlign, which can complete a pairwise alignment within one second. Expand
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