Yen-Fu Chang

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SARSA is a web tool that can be used to align two or more RNA tertiary structures. The basic idea behind SARSA is that we use the vector quantization approach to derive a structural alphabet (SA) of 23 nucleotide conformations, via which we transform RNA 3D structures into 1D sequences of SA letters and then utilize classical sequence alignment methods to(More)
Three-dimensional integrated circuits (3D ICs) offer significant improvements over two-dimensional circuits in several aspects. Classic 3D floorplanning algorithm places each module at one single die. However, power consumption and wirelength of a 3D IC may be further reduced if it contains folding modules or stack modules such as stack memory. Hence, this(More)
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