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Genome-scale DNA methylation maps of pluripotent and differentiated cells
DNA methylation is essential for normal development and has been implicated in many pathologies including cancer. Our knowledge about the genome-wide distribution of DNA methylation, how it changesExpand
Design and Implementation of a TCG-based Integrity Measurement Architecture
We present the design and implementation of a secure integrity measurement system for Linux. Expand
Dissecting direct reprogramming through integrative genomic analysis
This corrects the article DOI: 10.1038/nature07056
Mapping and Analysis of Chromatin State Dynamics in Nine Human Cell Types
Chromatin profiling has emerged as a powerful means for genome annotation and detection of regulatory activity. Here we map nine chromatin marks across nine cell types to systematically characterizeExpand
Comparative Epigenomic Analysis of Murine and Human Adipogenesis
We report the generation and comparative analysis of genome-wide chromatin state maps, PPARγ and CTCF localization maps, and gene expression profiles from murine and human models of adipogenesis. TheExpand
A User's Guide to the Encyclopedia of DNA Elements (ENCODE)
The mission of the Encyclopedia of DNA Elements (ENCODE) Project is to enable the scientific and medical communities to interpret the human genome sequence and apply it to understand human biologyExpand
HyperSentry: enabling stealthy in-context measurement of hypervisor integrity
This paper presents HyperSentry, a novel framework to enable stealthy and in-context measurement of the runtime integrity of a running hypervisor (or any other highest privileged software layer on a system). Expand
Systematic analysis of chromatin state dynamics in nine human cell types
Chromatin profiling has emerged as a powerful means of genome annotation and detection of regulatory activity. The approach is especially well suited to the characterization of non-coding portions ofExpand
Cellular source and mechanisms of high transcriptome complexity in the mammalian testis.
Understanding the extent of genomic transcription and its functional relevance is a central goal in genomics research. However, detailed genome-wide investigations of transcriptome complexity inExpand
Genome-wide Chromatin State Transitions Associated with Developmental and Environmental Cues
Differences in chromatin organization are key to the multiplicity of cell states that arise from a single genetic background, yet the landscapes of in vivo tissues remain largely uncharted. Here, weExpand