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A novel rearrangement in the mitochondrial genome of tongue sole, Cynoglossus semilaevis: control region translocation and a tRNA gene inversion.
- X. Kong, Xiaoli Dong, Y. Zhang, W. Shi, Zhongming Wang, Z. Yu
- Biology, Medicine
- Genome
- 10 November 2009
The organization of fish mitochondrial genomes (mitogenomes) is quite conserved, usually with the heavy strand encoding 12 of 13 protein-coding genes and 14 of 22 tRNA genes, and the light strand… Expand
A novel model of double replications and random loss accounts for rearrangements in the Mitogenome of Samariscus latus (Teleostei: Pleuronectiformes)
- W. Shi, Xian-Guang Miao, X. Kong
- Biology, Medicine
- BMC Genomics
- 9 May 2014
BackgroundAlthough more than one thousand complete mitochondrial DNA (mtDNA) sequences have been determined in teleostean fishes, only a few gene rearrangements have been observed, and genome-scale… Expand
IDENTIFICATION OF SEVEN CRASSOSTREA OYSTERS FROM THE SOUTH CHINA SEA USING PCR - RFLP ANALYSIS
- Jianjun Xia, Z. Yu, X. Kong
- Biology
- 1 May 2009
We have developed a PCR-RFLP assay of two mitochondrial [16S rDNA and cytochrome oxidase I (COI)] and one nuclear (ITS-1) gene fragment for the identification of seven Crassostrea oysters from the… Expand
Complete mitochondrial DNA sequence of oyster Crassostrea hongkongensis-a case of "Tandem duplication-random loss" for genome rearrangement in Crassostrea?
- Z. Yu, Zhengpeng Wei, X. Kong, W. Shi
- Biology, Medicine
- BMC Genomics
- 11 October 2008
BackgroundMitochondrial DNA sequences are extensively used as genetic markers not only for studies of population or ecological genetics, but also for phylogenetic and evolutionary analyses. Complete… Expand
Tandem Duplication and Random Loss for mitogenome rearrangement in Symphurus (Teleost: Pleuronectiformes)
- W. Shi, L. Gong, S. Wang, Xian-Guang Miao, X. Kong
- Biology, Medicine
- BMC Genomics
- 6 May 2015
BackgroundThe mitochondrial genomes (mitogenomes) of flatfishes (Pleuronectiformes) exhibit highly diversified types of large-scale gene rearrangements. We have reported that the mitogenomes of… Expand
Complete mitogenome sequences of four flatfishes (Pleuronectiformes) reveal a novel gene arrangement of L-strand coding genes
- W. Shi, X. Dong, Z. Wang, Xian-Guang Miao, S. Wang, X. Kong
- Biology, Medicine
- BMC Evolutionary Biology
- 20 August 2013
BackgroundFew mitochondrial gene rearrangements are found in vertebrates and large-scale changes in these genomes occur even less frequently. It is difficult, therefore, to propose a mechanism to… Expand
Flatfish monophyly refereed by the relationship of Psettodes in Carangimorphariae
- W. Shi, Shixi Chen, +4 authors H. Yu
- Biology, Medicine
- BMC Genomics
- 25 May 2018
BackgroundThe monophyly of flatfishes has not been supported in many molecular phylogenetic studies. The monophyly of Pleuronectoidei, which comprises all but one family of flatfishes, is broadly… Expand
Genetic diversity and historical demography of Chinese shrimp Feneropenaeus chinensis in Yellow Sea and Bohai Sea based on mitochondrial DNA analysis
Genetic structure and demographic history of shrimp Feneropenaeus chinensis were examined using sequence data from portions of the mitochondrial cytochrome c oxidase I (COI) gene. Samples of 91… Expand
Control region translocation and a tRNA gene inversion in the mitogenome of Paraplagusia japonica (Pleuronectiformes: Cynoglossidae)
- L. Gong, W. Shi, Z. Wang, Xian-Guang Miao, X. Kong
- Biology, Medicine
- Mitochondrial DNA
- 8 November 2013
Paraplagusia japonica (Cynoglossidae, Soleoidei) is characterized by a bilaterally asymmetrical and a series of fringes on the lips on the ocular side. Here we report for the first time the… Expand
Comparative mitogenomic analyses of three scallops (Bivalvia: Pectinidae) reveal high level variation of genomic organization and a diversity of transfer RNA gene sets
- X. Wu, Xiaodong Xu, Z. Yu, X. Kong
- Biology, Medicine
- BMC Research Notes
- 5 May 2009
BackgroundIt can be seen from the available mollusk mitogenomes that the family Pectinidae exhibits the most variation in genome organization. In this study, comparative mitogenomic analyses were… Expand
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