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The Complete Plastome Sequences of Four Orchid Species: Insights into the Evolution of the Orchidaceae and the Utility of Plastomic Mutational Hotspots
- Zhitao Niu, Qing-yun Xue, Shuying Zhu, Jing Sun, Wei Liu, Xiaoyu Ding
- BiologyFront. Plant Sci.
- 3 May 2017
Orchidaceae (orchids) is the largest family in the monocots, including about 25,000 species in 880 genera and five subfamilies. Many orchids are highly valued for their beautiful and long-lasting…
Sequencing and characterization of the Monocellicampa pruni (Hymenoptera: Tenthredinidae) mitochondrial genome
This is the first sequenced mitochondrial genome from the family Tenthredinidae of the order Hymenoptera and the gene arrangement of the sequenced region was similar to the pupative ancestral arrangement of insects.
Mutational Biases and GC-Biased Gene Conversion Affect GC Content in the Plastomes of Dendrobium Genus
- Zhitao Niu, Qing-yun Xue, Xiaoyu Ding
- BiologyInternational journal of molecular sciences
- 1 November 2017
It is suggested that both mutational biases and gBGC affect GC content in the plastomes of Dendrobium genus, which is one of the largest genera in the orchid species.
The large single-copy (LSC) region functions as a highly effective and efficient molecular marker for accurate authentication of medicinal Dendrobium species
Identification of complete mitochondrial genome of the tufted deer
- H. Pang, Wei Liu, Yaguang Chen, Lin Fang, Xiran Zhang, Xiangrong Cao
- BiologyMitochondrial DNA
- 1 January 2008
The mt genome of the tufted deer Elaphodus cephalophus is identified and it is found that GTG is the start codon of the NADH4L gene and the cyt b gene has a subterminal AAA followed by the stop codon TAG.
Plastome-wide comparison reveals new SNV resources for the authentication of Dendrobium huoshanense and its corresponding medicinal slice (Huoshan Fengdou)
The complete mitochondrial genome of Anas penelope (Anatidae: Anas)
- Xiaoping Sun, Chaochao Hu, Shuang Li, M. Zhai, Wei Liu, Yinlong Zhang
- BiologyMitochondrial DNA. Part B, Resources
- 29 May 2020
The complete mitochondrial DNA genome of the Eurasian Wigeon, Anas penelope, was mapped by the next-generation sequencing and Mega 7.0 to validate the phylogenetic relationship and 25 published complete mitochondrial genomes of Anseriformes along with the genome of Terek sandpiper were used to construct the phylogenetics tree.
The complete mitochondrial genome of the codling moth Cydia pomonella (Lepidoptera: Tortricidae)
The complete mitochondrial genome of the codling moth Cydia pomonella (Lepidoptera: Tortricidae) was determined. The genome is 15,253 bp long with 37 typical animal mitochondrial genes and an…
Phylogeography of the endangered orchid Dendrobium moniliforme in East Asia inferred from chloroplast DNA sequences
- Meirong Ye, Wei Liu, Qing-yun Xue, B. Hou, Jing Luo, Xiaoyu Ding
- BiologyMitochondrial DNA. Part A, DNA mapping…
- 1 November 2017
The results supported the hypothesis that glacial refugia were maintained on different spatial-temporal scales in the SJFR during the last glacial maximum or earlier cold periods, suggesting that Quaternary refugial isolation promoted allopatric speciation of D. moniliforme in East Asia.
The complete mitochondrial genome of the summer fruit tortrix moth Adoxophyes orana (Lepidoptera: Tortricidae)
The complete mitochondrial genome of the summer fruit tortrix moth Adoxophyes orana (Lepdioptera: Tortricidae) was determined and trnM was rearranged to the upstream of trnI–trnQ-trnM cluster compared with the pupative ancestral arrangement of insects.