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Recent developments in the PHENIX software for automated crystallographic structure determination.
A new software system called PHENIX (Python-based Hierarchical ENvironment for Integrated Xtallography) is being developed for the automation of crystallographic structure solution. This will provideExpand
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Lightweight object oriented structure analysis: Tools for building tools to analyze molecular dynamics simulations
LOOS (Lightweight Object Oriented Structure-analysis) is a C++ library designed to facilitate making novel tools for analyzing molecular dynamics simulations by abstracting out the repetitive tasks,Expand
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Automated structure determination with phenix
A new software system called PHENIX (Python-based Hierarchical ENvironment for Integrated Xtallography) has been developed for the automation of crystallographic structure solution. This providesExpand
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Crystallographic protein model-building on the web
UNLABELLED X-ray crystallography is the most widely used method to determine the 3D structure of protein molecules. One of the most difficult steps in protein crystallography is model-building, whichExpand
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TEXTAL TM : Artificial Intelligence Techniques for Automated Protein Structure Determination.
X-ray crystallography is the most widely used method for determining the three-dimensional structures of proteins and other macromolecules. One of the most difficult steps in crystallography isExpand
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Determining Relevant Features to Recognize Electron Density Patterns in X-ray Protein Crystallography
High-throughput computational methods in X-ray protein crystallography are indispensable to meet the goals of structural genomics. In particular, automated interpretation of electron density maps,Expand
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TEXTAL™: Automated Crystallographic Protein Structure Determination
This paper reports on TEXTAL™, a deployed application that uses a variety of AI techniques to automate the process of determining the 3D structure of proteins by x-ray crystallography. The TEXTAL™Expand
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Efficient retrieval of electron density patterns for modeling proteins by X-ray crystallography
Inefficient case retrieval is a major problem in many case-based reasoning systems, especially when case matching is expensive and the case-base is large. In this paper, we present a two-phaseExpand
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