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Publications Influence

Single-Cell-Based Analysis Highlights a Surge in Cell-to-Cell Molecular Variability Preceding Irreversible Commitment in a Differentiation Process

- Angélique Richard, Loïs Boullu, +12 authors O. Gandrillon
- Biology, Medicine
- PLoS biology
- 1 December 2016

In some recent studies, a view emerged that stochastic dynamics governing the switching of cells from one differentiation state to another could be characterized by a peak in gene expression… Expand

132 7- PDF

Inferring gene regulatory networks from single-cell data: a mechanistic approach

- Ulysse Herbach, Arnaud Bonnaffoux, Thibault Espinasse, O. Gandrillon
- Computer Science, Biology
- BMC Systems Biology
- 9 May 2017

TLDR

33 1- PDF

Estimating the transition matrix of a Markov chain observed at random times

- F. Barsotti, Y. D. Castro, Thibault Espinasse, P. Rochet
- Mathematics
- 2 May 2014

In this paper we develop a statistical estimation technique to recover the transition kernel $P$ of a Markov chain $X=(X_m)_{m \in \mathbb N}$ in presence of censored data. We consider the situation… Expand

13 1- PDF

A Coupling of the Spectral Measures at a Vertex

- Thibault Espinasse, P. Rochet
- Computer Science, Mathematics
- Electron. J. Comb.
- 24 April 2019

TLDR

1 1- PDF

A Combinatorial Approach to a Model of Constrained Random Walkers

- Thibault Espinasse, N. Guillotin-Plantard, P. Nadeau
- Mathematics, Computer Science
- Comb. Probab. Comput.
- 23 February 2014

TLDR

1 1- PDF

Reconstructing undirected graphs from eigenspaces

- Y. D. Castro, Thibault Espinasse, P. Rochet
- Mathematics, Computer Science
- J. Mach. Learn. Res.
- 26 March 2016

TLDR

6- PDF

Relations Between Connected and Self-Avoiding Hikes in Labelled Complete Digraphs

- Thibault Espinasse, P. Rochet
- Mathematics, Computer Science
- Graphs Comb.
- 1 September 2016

TLDR

3

REDUCTION OF A STOCHASTIC MODEL OF GENE EXPRESSION: LAGRANGIAN DYNAMICS GIVES ACCESS TO BASINS OF ATTRACTION AS CELL TYPES AND METASTABILTY

- E. Ventre, Thibault Espinasse, Charles-Edouard Bréhier, Vincent Calvez, Thomas Lepoutre, O. Gandrillon
- Mathematics, Biology
- 5 September 2020

Differentiation is the process whereby a cell acquires a specific phenotype, by differential gene expression as a function of time. This is thought to result from the dynamical functioning of an… Expand

1

Polynomial regression under shape constraints

- F. Wahl, Thibault Espinasse
- Mathematics
- 15 October 2014

Calculating regression under shape constraints is a problem addressed by statisticians since long. This paper shows how to calculate a polynomial regression of any degree and of any number of… Expand

1

Relations between connected and self-avoiding walks in a digraph

- Thibault Espinasse, P. Rochet
- Mathematics
- 21 May 2015

Walks in a directed graph can be given a partially ordered structure that extends to possibly unconnected objects, called hikes. Studying the incidence algebra on this poset reveals unsuspected… Expand

1- PDF