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Complete mitochondrial genome of the miiuy croaker Miichthys miiuy (Perciformes, Sciaenidae) with phylogenetic consideration.
TLDR
The complete sequence of the 16,493 nucleotide mitochondrial genome from the single species of the family Sciaenidae, the miiuy croaker, Miichthys mIIuy, was determined and the monophyly of Pseudosciaeniae was not supported, which is against with the morphological results. Expand
Characterization of the Major Histocompatibility Complex Class II Genes in Miiuy Croaker
TLDR
A series of site-model tests implemented in the CODEML program revealed that positive Darwinian selection is likely the cause of the molecular evolution in the fish MHC class II genes. Expand
Complete mitochondrial genome of Trypauchen vagina (Perciformes, Gobioidei)
TLDR
The complete mitochondrial genome of Trypauchen vagina was determined and an incomplete tandem repeat unit is detected within the CR, suggesting this mitogenome sequence data would play an important role in population genetics and phylogenetic analysis of the Gobioidei. Expand
Complete mitochondrial genome of Oxuderces dentatus (Perciformes, Gobioidei)
TLDR
The complete mitochondrial genome (mitogenome) of Oxuderces dentatus was determined and it was found that this mitogenome sequence data would play an important role in population genetics and phylogenetic analysis of the Gobioidei. Expand
Molecular cloning, genomic structure, polymorphism and expression analysis of major histocompatibility complex class IIA and IIB genes of half-smooth tongue sole (Cynoglossus semilaevis).
TLDR
Real-time quantitative RT-PCR demonstrated that the MHC class IIA and IIB were ubiquitously expressed in twelve normal tissues and six different alleles observed in a single individual may suggest that there are at least three loci in class IIB genes. Expand
Growth differences and differential expression analysis of pituitary adenylate cyclase activating polypeptide (PACAP) and growth hormone-releasing hormone (GHRH) between the sexes in half-smooth
TLDR
Difference in growth and mRNA expression of PACAP and GHRH between the sexes in half-smooth tongue sole, an important cultured fish species indicating sexually growth dimorphism in China, is examined to provide important clues for understanding the sexual growthDimorphism mechanisms inhalf-sm Smooth tongue sole. Expand
Transcriptomic Analysis of Endangered Chinese Salamander: Identification of Immune, Sex and Reproduction-Related Genes and Genetic Markers
TLDR
This dataset represents the first transcriptome analysis of the Chinese salamander (Hynobius chinensis), to be also the first time of hynobiidae, and will provide valuable resource for further research in discovery of new genes, protection of population, adaptive evolution and survey of various pathways. Expand
LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly
TLDR
LR_Gapcloser is a fast and efficient tool that can be used to close gaps and improve the contiguity of genome assemblies and a proposed hybrid assembly including this tool promises reference-grade assemblies. Expand
The complete mitochondrial genome of bighead croaker, Collichthys niveatus (Perciformes, Sciaenidae): structure of control region and phylogenetic considerations
TLDR
Phylogenetic analyses do not support the monophyly of Pseudosciaeniae, which is against with the morphological results, and C. niveatus is most closely related to Larimichthys polyactis, and Collichthy and Larimicthys may be merged into one genus, based on the current datasets. Expand
Complete mitochondrial genome of the striped sandgoby Acentrogobius pflaumii (Perciformes, gobiidae)
TLDR
The striped sandgoby, Acentrogobius pflaumii, is a widespread goby inhabiting shallow sandy–muddy bottoms in temperate riverine estuaries and inner bays and has the typical vertebrate mitochondrial gene arrangement. Expand
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