Faster deterministic Feedback Vertex Set
- T. Kociumaka, Marcin Pilipczuk
- Computer ScienceInformation Processing Letters
- 15 June 2013
Optimal-Time Dictionary-Compressed Indexes
- Anders Roy Christiansen, Mikko Berggren Ettienne, T. Kociumaka, G. Navarro, N. Prezza
- Computer ScienceACM Trans. Algorithms
- 30 November 2018
The first self-indexes able to count and locate pattern occurrences in optimal time within a space bounded by the size of the most popular dictionary compressors are described, combining several recent findings including string attractors and grammars based on locally consistent parsing.
Towards a Definitive Measure of Repetitiveness
- T. Kociumaka, G. Navarro, N. Prezza
- Computer Science, MathematicsLatin American Symposium on Theoretical…
- 4 October 2019
A smaller measure, $\delta$, is studied, which can be computed in linear time and captures better the concept of compressibility in repetitive strings, and it is proved that, for some string families, it holds $\gamma = \Omega(\delta \log n)$.
Order-Preserving Incomplete Suffix Trees and Order-Preserving Indexes
- M. Crochemore, C. Iliopoulos, Tomasz Waleń
- Computer Science, MathematicsSPIRE
- 7 October 2013
An O(nloglogn) time construction of an index that enables order-preserving pattern matching queries in time proportional to pattern length and an O(\frac{n\log{n}}{\log\log-n}}) time algorithm constructing complete order- Preserving suffix trees.
Sparse Suffix Tree Construction in Optimal Time and Space
- Pawel Gawrychowski, T. Kociumaka
- Computer ScienceACM-SIAM Symposium on Discrete Algorithms
- 2 August 2016
A linear-time Monte Carlo algorithm is designed for sparse suffix tree construction, and this algorithm is complemented with a deterministic verification procedure that improves upon the bound of O(n log b) obtained by I et al.
String synchronizing sets: sublinear-time BWT construction and optimal LCE data structure
- Dominik Kempa, T. Kociumaka
- Computer ScienceSymposium on the Theory of Computing
- 8 April 2019
This paper proposes the first algorithm that breaks the O(n)-time barrier for BWT construction, based on a novel concept of string synchronizing sets, which is of independent interest and shows that this technique lets us design a data structure of the optimal size O(N/logn) that answers Longest Common Extension queries (LCE queries) in O(1) time and, furthermore, can be deterministically constructed in the optimal O( n/ logn) time.
Enhanced string covering
- T. Flouri, C. Iliopoulos, Wojciech Tyczynski
- Mathematics, Computer ScienceTheoretical Computer Science
- 1 September 2013
Fast Algorithm for Partial Covers in Words
- T. Kociumaka, S. Pissis, J. Radoszewski, W. Rytter, Tomasz Wale'n
- Computer Science, MathematicsAlgorithmica
- 17 June 2013
A new notion of \alpha $$α-partial cover is introduced, which can be viewed as a relaxed variant of cover, that is, a factor covering at least $$\alpha $$ α positions in $$w$$w.
Efficient data structures for internal queries in texts
- T. Kociumaka
- Computer Science
- 30 December 2019
This dissertation provides the first optimal data structure for smaller alphabets of size σ n, which handles queries in O(1) time, takes O(n/ logσ n) space, and admits an O-time construction of T from the packed representation of T with Θ(logσn) characters in each machine word.
Constant Factor Approximation for Capacitated k-Center with Outliers
- Marek Cygan, T. Kociumaka
- MathematicsSymposium on Theoretical Aspects of Computer…
- 13 January 2014
The first constant factor approximation algorithm with approximation ratio of 25 even for the case of non-uniform hard capacities is presented.
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