Svetlana Lockwood

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BACKGROUND Anaplasma marginale, an obligate intracellular alphaproteobacterium in the order Rickettsiales, is a tick-borne pathogen and the leading cause of anaplasmosis in cattle worldwide. Complete genome sequencing of A. marginale revealed that it has a type IV secretion system (T4SS). The T4SS is one of seven known types of secretion systems utilized by(More)
The potential benefits of environment automation for older adults and for individuals with physical limitations are becoming well known. At the same time, there is concern that high-tech solutions will not be widely accepted by this target population. In this paper we present the results of a human factors study in which we allow individuals with varied(More)
We present a new method for exploring cancer gene expression data based on tools from algebraic topology. Our method selects a small relevant subset from tens of thousands of genes while simultaneously identifying nontrivial higher order topological features, i.e., holes, in the data. We first circumvent the problem of high dimensionality by dualizing the(More)
Temperature-sensitive (TS) mutants are powerful tools to study gene function in vivo. These mutants exhibit wild-type activity at permissive temperatures and reduced activity at restrictive temperatures. Although random mutagenesis can be used to generate TS mutants, the procedure is laborious and unfeasible in multicellular organisms. Further, the(More)
The use of large-scale data analytics, aka Big Data, is becoming prevalent in most information technology discussions, especially for the life and health sciences. Frameworks such as MapReduce/Hadoop are offered as “Swiss-army knives” for extracting insights out of the terabyte-sized data. Beyond the sheer volume of the data, the complexity of the data(More)
Multiple important human and livestock pathogens employ ticks as their primary host vectors. It is not currently known whether this means of infecting a host arose once or many times during evolution. In order to address this question, we conducted a comparative genomics analysis on a set of bacterial pathogens from seven genera – Borrelia, Rickettsia,(More)
We assessed knowledge and practices related to antibiotic use in Kibera, an urban informal settlement in Kenya. Surveys was employed at the beginning (entry) and again at the end (exit) of a 5-month longitudinal study of AMR. Two-hundred households were interviewed at entry, of which 149 were also interviewed at exit. The majority (>65%) of respondents in(More)
20 Temperature-sensitive (TS) mutants are powerful tools to study gene function in 21 vivo. These mutants exhibit wild-type activity at permissive temperatures and reduced 22 activity at restrictive temperatures. Although random mutagenesis can be used to 23 generate TS mutants, the procedure is laborious and unfeasible in multicellular 24 organisms.(More)
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