Suzanne Lane

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MOTIVATION Automated annotation of neuroanatomical connectivity statements from the neuroscience literature would enable accessible and large-scale connectivity resources. Unfortunately, the connectivity findings are not formally encoded and occur as natural language text. This hinders aggregation, indexing, searching and integration of the reports. We(More)
The ability to computationally extract mentions of neuroanatomical regions from the literature would assist linking to other entities within and outside of an article. Examples include extracting reports of connectivity or region-specific gene expression. To facilitate text mining of neuroscience literature we have created a corpus of manually annotated(More)
Since its founding, NASA has been dedicated to the advancement of aeronautics and space science. The NASA Scientific and Technical Information (STI) Program Office plays a key part in helping NASA maintain this important role. The NASA STI Program Office is operated by Langley Research Center, the lead center for NASA's scientific and technical information.(More)
MOTIVATION Many microarray datasets are available online with formalized standards describing the probe sequences and expression values. Unfortunately, the description, conditions and parameters of the experiments are less commonly formalized and often occur as natural language text. This hinders searching, high-throughput analysis, organization and(More)
All statistics are calculated by Mathematica unless stated otherwise iii ACKNOWLEDGMENTS This report would not be possible without the support of the Team Pennsylvania Foundation, the Pennsylvania Department of Education, the Bill & Melinda Gates Foundation, and members of the Stakeholder Steering Committee who volunteered their time during Phase 1 of this(More)
Graphical abstracts---visual representations of the central concepts in an article---are emerging as a genre in STEM fields. Originally used in Chemistry to represent the primary molecules and reactions under investigation, graphical abstracts have spread to other science and engineering fields, and in the process have evolved significantly, adapting for(More)
BACKGROUND Reported outcomes of shoulder hemiarthroplasty for proximal humeral fractures have been poor due to tuberosity non-union or rotator cuff disruption. Newer designs provide features to allow secure tuberosity apposition and stabilisation. To evaluate the outcomes of a shoulder hemiarthroplasty system with "tuberosity friendly" features in the(More)