Slavko Zitnik

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Published literature in molecular genetics may collectively provide much information on gene regulation networks. Dedicated computational approaches are required to sip through large volumes of text and infer gene interactions. We propose a novel sieve-based relation extraction system that uses linear-chain conditional random fields and rules. Also, we(More)
Received (received date) Revised (revised date) Accepted (day month year) Communicated by (xxxxxxxxxx) Large software projects are among most sophisticated human-made systems consisting of a network of interdependent parts. Past studies of software systems from the perspective of complex networks have already led to notable discoveries with different(More)
The basic indicators of a researcher's productivity and impact are still the number of publications and their citation counts. These metrics are clear, straightforward, and easy to obtain. When a ranking of scholars is needed, for instance in grant, award, or promotion procedures, their use is the fastest and cheapest way of prioritizing some scientists(More)
Traditional information extraction (IE) tasks roughly consist of named-entity recognition, relation extraction and coreference resolution. Much work in this area focuses primarily on separate subtasks where best performance can be achieved only on specialized domains. In this paper we present a collective IE approach combining all three tasks by employing(More)
Due to numerous public information sources and services, many methods to combine heterogeneous data were proposed recently. However, general end-to-end solutions are still rare, especially systems taking into account different context dimensions. Therefore, the techniques often prove insufficient or are limited to a certain domain. In this paper we briefly(More)
Information Extraction (IE) is a process of extracting struc-tured data from unstructured sources. It roughly consists of subtasks named entity recognition, relation extraction and coreference resolution. Researchers have primarily focused just on one subtask or their combination in a pipeline. In this paper we introduce an intelligent collective IE system(More)
There are several data silos containing information about business entities and people but are not semantically connected. If in integration process of data sources trust management is also employed than we can expect much higher success rate in relations discovery among entities. Majority of current mash-up approaches that deal with integration of(More)
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