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Universal Dependencies v1: A Multilingual Treebank Collection
Cross-linguistically consistent annotation is necessary for sound comparative evaluation and cross-lingual learning experiments. It is also useful for multilingual system development and comparativeExpand
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Overview of BioNLP'09 Shared Task on Event Extraction
The paper presents the design and implementation of the BioNLP'09 Shared Task, and reports the final results with analysis. The shared task consists of three sub-tasks, each of which addressesExpand
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brat: a Web-based Tool for NLP-Assisted Text Annotation
We introduce the brat rapid annotation tool (BRAT), an intuitive web-based tool for text annotation supported by Natural Language Processing (NLP) technology. BRAT has been developed for richExpand
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BioInfer: a corpus for information extraction in the biomedical domain
BackgroundLately, there has been a great interest in the application of information extraction methods to the biomedical domain, in particular, to the extraction of relationships of genes, proteins,Expand
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All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
BackgroundAutomated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach for this task. InExpand
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Distributional Semantics Resources for Biomedical Text Processing
The openly available biomedical literature contains over 5 billion words in publication abstracts and full texts. Recent advances in unsupervised language processing methods have made it possible toExpand
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How to Train good Word Embeddings for Biomedical NLP
The quality of word embeddings depends on the input corpora, model architectures, and hyper-parameter settings. Using the state-of-the-art neural embedding tool word2vec and both intrinsic andExpand
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CoNLL 2017 Shared Task: Multilingual Parsing from Raw Text to Universal Dependencies
  • D. Zeman, M. Popel, +65 authors Daniel Zeman
  • Computer Science
  • CoNLL Shared Task
  • 2017
The Conference on Computational Natural Language Learning (CoNLL) features a shared task, in which participants train and test their learning systems on the same data sets. In 2017, one of two tasksExpand
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Comparative analysis of five protein-protein interaction corpora
BackgroundGrowing interest in the application of natural language processing methods to biomedical text has led to an increasing number of corpora and methods targeting protein-protein interactionExpand
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Overview of BioNLP Shared Task 2013
The BioNLP Shared Task 2013 is the third edition of the BioNLP Shared Task series that is a community-wide effort to address fine-grained, structural information extraction from biomedicalExpand
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