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Characterization, Genome Sequence, and Analysis of Escherichia Phage CICC 80001, a Bacteriophage Infecting an Efficient l-Aspartic Acid Producing Escherichiacoli
- Youqiang Xu, Yuyue Ma, S. Yao, Z. Jiang, Jiang Pei, Chi Cheng
- BiologyFood and Environmental Virology
- 1 March 2016
Escherichia phage CICC 80001 was isolated from the bacteriophage contaminated medium of an Escherichiacoli strain HY-05C (CICC 11022S) which could produce l-aspartic acid, and the key proteins leading to host-cell lysis were phylogenetically analyzed.
Thermoactinomyces daqus sp. nov., a thermophilic bacterium isolated from high-temperature Daqu.
Based on morphological and chemotaxonomic characteristics, DNA-DNA hybridization data and physiological properties, strain H-18(T), isolated from a high-temperature Daqu sample collected from the manufacturing process of a sesame-flavoured liquor in Shandong province, China, represents a novel species of the genus Thermoactinomyces.
Microsporomyces hainanensis sp. nov., Isolated from Hybrid Rice (Oryza sativa L.) Seeds
Molecular phylogenetic analysis of the D1/D2 domain of the large subunit rRNA gene and the internal transcribed spacer regions revealed that this new species is located in the Microsporomyces clade, with four closely related species, namely M. magnisporus, M. orientalis, bloemfonteinensis, and M. pini.
Novosphingobium clariflavum sp. nov., isolated from a household product plant.
The results obtained from phylogenetic analysis, DNA-DNA hybridization, and chemotaxonomic and phenotypic analysis support the conclusion that strain 164T represents a novel species of the genus Novosphingobium.
Scopulibacillus daqui sp. nov., a thermophilic bacterium isolated from high temperature daqu.
Based on morphological characteristics, chemotaxonomic characteristics, DNA-DNA hybridization data and physiological properties, strain ZQ18-1T represents a novel species of the genus Scopulibacillus, for which the name ScopULIBacillus daqui sp.
Bacteriophage therapy against Enterobacteriaceae
- Youqiang Xu, Yong Liu, Yang Liu, Jiang Pei, S. Yao, Chi Cheng
- Medicine, BiologyVirologica Sinica
- 3 February 2015
This paper summarizes the history of bacteriophage therapy, its bacterial lytic mechanisms, and the studies that have focused on Enterobacteriaceae and bacteriophile therapy.
gcType: a high-quality type strain genome database for microbial phylogenetic and functional research
This study describes web-based data analysis pipelines for genomic analyses and genome-based taxonomy, which could serve as a one-stop platform for the identification of prokaryotic species.
Halomonas alkalicola sp. nov., isolated from a household product plant.
It is evident from the genotypic and phenotypic data that strain 56-L4-10aEnT could be classified as a representative of a novel species of the genus Halomonas, for which the nameHalomonas alkalicola sp.
The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species
The GCM leads an internationally coordinated effort to sequence type strains and close gaps in the genomic maps of microorganisms, and aims to promote research by deep-mining genomic data.
Comparison of Meconium Microbiome in Dizygotic and Monozygotic Twins Born by Caesarean Section (CS)
The study uncovered that microbial diversity and components of the meconium microbiome between DZ and MZ twins were partially consistent with that in singleton neonates by cesarean delivery, but several distinctions related to the heritability supported genetic contributions to intestinal microbiome in early life.