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Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus.
Quasispecies nature of the genome of Grapevine fanleaf virus.
- P. Naraghi-Arani, S. Daubert, A. Rowhani
- Biology, MedicineThe Journal of general virology
- 1 July 2001
The data suggest that the GFLV genome consists of quasispecies populations, and that the subcloned sequences were found to vary from each other by as much as 13%, and the encoded amino acid sequences by as little as 9%.
Characteristics of a strong promoter from figwort mosaic virus: comparison with the analogous 35S promoter from cauliflower mosaic virus and the regulated mannopine synthase promoter
A segment of DNA from the genome of figwort mosaic virus (FMV) strain M3 possesses promoter activity when tested in electroporated protoplasts from, and transgenic plants of, Nicotiana tabacum cv.…
Genomic and biological analysis of Grapevine leafroll-associated virus 7 reveals a possible new genus within the family Closteroviridae.
Deep sequencing evidence from single grapevine plants reveals a virome dominated by mycoviruses
- M. Al Rwahnih, S. Daubert, J. R. Úrbez-Torres, F. Cordero, A. Rowhani
- BiologyArchives of Virology
- 8 December 2010
The virome in single grapevines is characterized by 454 high-throughput sequencing of double-stranded RNA recovered from the vine stem, revealing a substantial set of sequences similar to those of fungal viruses.
Development of a detection system for viruses of woody plants based on PCR analysis of immobilized virions
The genomes of several viruses infecting woody host plants were found to serve as templates for the reverse transcriptase-polymerase chain reaction (RT-PCR) while still contained within their capsids…
PARTIAL CHARACTERIZATION OF A NEW AMPELOVIRUS ASSOCIATED WITH GRAPEVINE LEAFROLL DISEASE
The name Grapevine leafroll associated virus 9 (GLRaV-9) is tentatively proposed for the novel pathogen.
Protein bound to the genome RNAs of cowpea mosaic virus.
A previously undiscovered protein that is associated with the virion of cowpea mosaic virus (CPMV) co-purified with the viral RNA and is probably an apparently covalent protein-oligonucleotide complex derived from the 5′-end of CPMV RNAs.
Comparison of Next-Generation Sequencing Versus Biological Indexing for the Optimal Detection of Viral Pathogens in Grapevine.
- M. Al Rwahnih, S. Daubert, D. Golino, C. Islas, A. Rowhani
- Biology, MedicinePhytopathology
- 29 May 2015
Next-generation sequencing analysis of grapevine material was found to be superior to the standard bioassay in detection of viruses of agronomic significance, including virus infections at low titers.
Characterization of latent viral infection of olive trees in the National Clonal Germplasm Repository in California.
The first comprehensive virus testing of the USDA National Clonal Germplasm Repository collection using molecular diagnostic tools is completed, with positive results for Olive leaf yellowing-associated virus and Cucumber mosaic virus.