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- Publications
- Influence
GENCLONE : a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization
- S. Arnaud-Haond, K. Belkhir
- Biology
- 9 November 2006
GENCLONE 1.0 is designed for studying clonality and its spatial components using genotype data with molecular markers from haploid or diploid organisms. GENCLONE 1.0 performs the following tasks. (i)… Expand
Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era
- Pierre-Alexandre Gagnaire, T. Broquet, +5 authors N. Bierne
- Biology, Medicine
- Evolutionary applications
- 28 July 2015
Estimating the rate of exchange of individuals among populations is a central concern to evolutionary ecology and its applications to conservation and management. For instance, the efficiency of… Expand
RClone: a package to identify MultiLocus Clonal Lineages and handle clonal data sets in r.
- Diane Bailleul, Diane Bailleul, S. Stoeckel, S. Arnaud-Haond, S. Arnaud-Haond
- Biology
- 1 August 2016
Summary
Partially, clonal species are common in the Tree of Life. And yet, population genetic models still mostly focus on the extremes: strictly sexual versus purely asexual reproduction. Here,… Expand
EDENetworks: A user‐friendly software to build and analyse networks in biogeography, ecology and population genetics
- Mikko Kivelä, S. Arnaud-Haond, J. Saramäki
- Biology, Medicine
- Molecular ecology resources
- 1 January 2015
The recent application of graph‐based network theory analysis to biogeography, community ecology and population genetics has created a need for user‐friendly software, which would allow a wider… Expand
Biogeography revisited with network theory: retracing the history of hydrothermal vent communities.
- Y. Moalic, D. Desbruyéres, C. B. Duarte, A. Rozenfeld, Charleyne Bachraty, S. Arnaud-Haond
- Biology, Medicine
- Systematic biology
- 2012
Defining biogeographic provinces to understand the history and evolution of communities associated with a given kind of ecosystem is challenging and usually requires a priori assumptions to be made.… Expand
Entangled effects of allelic and clonal (genotypic) richness in the resistance and resilience of experimental populations of the seagrass Zostera noltii to diatom invasion
- S. I. Massa, C. Paulino, E. Serrão, C. M. Duarte, S. Arnaud-Haond
- Biology, Medicine
- BMC Ecology
- 23 October 2013
BackgroundThe relationship between species diversity and components of ecosystem stability has been extensively studied, whilst the influence of the genetic component of biodiversity remains poorly… Expand
Linking basin‐scale connectivity, oceanography and population dynamics for the conservation and management of marine ecosystems
- M. Dubois, V. Rossi, E. Ser-Giacomi, S. Arnaud-Haond, C. López, E. Hernández-García
- Biology
- 1 May 2016
Aim
Assessing the spatial structure and dynamics of marine populations is still a major challenge in ecology. The need to manage marine resources from ecosystem and large-scale perspectives is… Expand
SSR-based analysis of clonality, spatial genetic structure and introgression from the Lombardy poplar into a natural population of Populus nigra L. along the Loire River
- N. Chenault, S. Arnaud-Haond, +5 authors A. Dowkiw
- Biology
- Tree Genetics & Genomes
- 11 August 2011
A scarcity of favourable habitats and introgression from exotic cultivars are two major threats to black poplars (Populus nigra L.) in Europe. Natural vegetative propagation contributes to… Expand
Large‐scale genetic panmixia in the blue shark (Prionace glauca): A single worldwide population, or a genetic lag‐time effect of the “grey zone” of differentiation?
- Diane Bailleul, Alicia Mackenzie, Olivier Sacchi, F. Poisson, N. Bierne, S. Arnaud-Haond
- Biology, Medicine
- Evolutionary applications
- 22 February 2018
The blue shark Prionace glauca, among the most common and widely studied pelagic sharks, is a top predator, exhibiting the widest distribution range. However, little is known about its population… Expand
Hologenome theory supported by cooccurrence networks of species-specific bacterial communities in siphonous algae (Caulerpa).
- T. Aires, Y. Moalic, E. Serrão, S. Arnaud-Haond
- Medicine, Biology
- FEMS microbiology ecology
- 1 July 2015
The siphonous algae of the Caulerpa genus harbor internal microbial communities hypothesized to play important roles in development, defense and metabolic activities of the host. Here, we… Expand