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- Publications
- Influence
Reconstructing the early evolution of Fungi using a six-gene phylogeny
- Timothy Y. James, F. Kauff, +67 authors R. Vilgalys
- Biology, Medicine
- Nature
- 19 October 2006
The ancestors of fungi are believed to be simple aquatic forms with flagellated spores, similar to members of the extant phylum Chytridiomycota (chytrids). Current classifications assume that… Expand
The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits.
- C. L. Schoch, Gi-Ho Sung, +61 authors J. Spatafora
- Biology, Medicine
- Systematic biology
- 1 April 2009
We present a 6-gene, 420-species maximum-likelihood phylogeny of Ascomycota, the largest phylum of Fungi. This analysis is the most taxonomically complete to date with species sampled from all 15… Expand
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits.
- F. Lutzoni, F. Kauff, +41 authors R. Vilgalys
- Biology, Medicine
- American journal of botany
- 1 October 2004
Based on an overview of progress in molecular systematics of the true fungi (Fungi/Eumycota) since 1990, little overlap was found among single-locus data matrices, which explains why no large-scale… Expand
New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes.
- J. Miadlikowska, F. Kauff, +27 authors F. Lutzoni
- Biology, Medicine
- Mycologia
- 1 November 2006
The Lecanoromycetes includes most of the lichen-forming fungal species (> 13500) and is therefore one of the most diverse class of all Fungi in terms of phenotypic complexity. We report phylogenetic… Expand
Geographic variation in algal partners of Cladonia subtenuis (Cladoniaceae) highlights the dynamic nature of a lichen symbiosis.
- Rebecca Yahr, R. Vilgalys, P. Depriest
- Biology, Medicine
- The New phytologist
- 1 September 2006
Multiple interacting factors may explain variation present in symbiotic associations, including fungal specificity, algal availability, mode of transmission and fungal selectivity. To separate these… Expand
DNA barcoding of lichenized fungi demonstrates high identification success in a floristic context.
- Laura J. Kelly, P. Hollingsworth, +4 authors Rebecca Yahr
- Biology, Medicine
- The New phytologist
- 1 July 2011
• Efforts are currently underway to establish a standard DNA barcode region for fungi; we tested the utility of the internal transcribed spacer (ITS) of nuclear ribosomal DNA for DNA barcoding in… Expand
Strong fungal specificity and selectivity for algal symbionts in Florida scrub Cladonia lichens
- Rebecca Yahr, R. Vilgalys, P. Depriest
- Biology, Medicine
- Molecular ecology
- 1 November 2004
Symbiosis is a major theme in the history of life and can be an important force driving evolution. However, across symbioses, it is difficult to tease apart the mechanisms that structure the… Expand
Evolution of complex symbiotic relationships in a morphologically derived family of lichen-forming fungi.
- Pradeep K. Divakar, Ana Crespo, +57 authors H. Lumbsch
- Biology, Medicine
- The New phytologist
- 1 December 2015
We studied the evolutionary history of the Parmeliaceae (Lecanoromycetes, Ascomycota), one of the largest families of lichen-forming fungi with complex and variable morphologies, also including… Expand
Testing the use of ITS rDNA and protein-coding genes in the generic and species delimitation of the lichen genus Usnea (Parmeliaceae, Ascomycota).
- C. Truong, P. Divakar, Rebecca Yahr, A. Crespo, P. Clerc
- Biology, Medicine
- Molecular phylogenetics and evolution
- 1 August 2013
In lichen-forming fungi, traditional taxonomical concepts are frequently in conflict with molecular data, and identifying appropriate taxonomic characters to describe phylogenetic clades remains… Expand
No combination of morphological, ecological or chemical characters can reliably diagnose species in the Parmelia saxatilis aggregate in Scotland
- Eleanor I. Corsie, P. Harrold, Rebecca Yahr
- 1 March 2019
The Parmelia saxatilis aggregate is comprised of three species in Europe, proposed to differ in morphological, distributional or chemical characters. In this study, we sampled nearly 200 thalli from… Expand