R. Apweiler
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- Publications
- Influence
UniProt: the Universal Protein knowledgebase
- R. Apweiler, A. Bairoch, +12 authors L. Yeh
- Computer Science, Medicine
- Nucleic Acids Res.
- 2004
To provide the scientific community with a single, centralized, authoritative resource for protein sequences and functional information, the Swiss-Prot, TrEMBL and PIR protein database activities… Expand
InterProScan - an integration platform for the signature-recognition methods in InterPro
- E. Zdobnov, R. Apweiler
- Computer Science, Medicine
- Bioinform.
- 1 September 2001
UNLABELLED
InterProScan is a tool that scans given protein sequences against the protein signatures of the InterPro member databases, currently--PROSITE, PRINTS, Pfam, ProDom and SMART. The number of… Expand
InterProScan: protein domains identifier
- Emmanuel Quevillon, Ville Silventoinen, +4 authors Rodrigo Lopez
- Medicine, Computer Science
- Nucleic Acids Res.
- 27 June 2005
InterProScan [E. M. Zdobnov and R. Apweiler (2001) Bioinformatics, 17, 847–848] is a tool that combines different protein signature recognition methods from the InterPro [N. J. Mulder, R. Apweiler,… Expand
The Universal Protein Resource (UniProt)
- A. Bairoch, R. Apweiler, +12 authors L. Yeh
- Medicine, Biology
- Nucleic Acids Res.
- 17 December 2004
The Universal Protein Resource (UniProt) provides the scientific community with a single, centralized, authoritative resource for protein sequences and functional information. Formed by uniting the… Expand
ProteomeXchange provides globally co-ordinated proteomics data submission and dissemination
- J. Vizcaíno, E. Deutsch, +22 authors H. Hermjakob
- Medicine, Biology
- Nature Biotechnology
- 5 February 2014
5. Tools available and ways to submit data to PX ............................................................. 11 5.1. MS/MS data submissions to PRIDE… Expand
The SWISS-PROT protein sequence data bank and its supplement TrEMBL
- A. Bairoch, R. Apweiler
- Biology, Computer Science
- Nucleic Acids Res.
- 1997
SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotations (such as the description of the function of a protein, structure of its domains,… Expand
Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads
- Kai Ye, Marcel H. Schulz, Q. Long, R. Apweiler, Z. Ning
- Medicine, Computer Science
- Bioinform.
- 26 June 2009
Motivation: There is a strong demand in the genomic community to develop effective algorithms to reliably identify genomic variants. Indel detection using next-gen data is difficult and… Expand
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
- B. Boeckmann, A. Bairoch, +9 authors M. Schneider
- Biology, Computer Science
- Nucleic Acids Res.
- 2003
The SWISS-PROT protein knowledgebase (http://www.expasy.org/sprot/ and http://www.ebi.ac.uk/swissprot/) connects amino acid sequences with the current knowledge in the Life Sciences. Each protein… Expand
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
- A. Bairoch, R. Apweiler
- Biology, Medicine
- Nucleic Acids Res.
- 2000
SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domains structure, post-translational… Expand
InterPro: the integrative protein signature database
- S. Hunter, R. Apweiler, +35 authors C. Yeats
- Medicine, Computer Science
- Nucleic Acids Res.
- 21 October 2008
The InterPro database (http://www.ebi.ac.uk/interpro/) integrates together predictive models or ‘signatures’ representing protein domains, families and functional sites from multiple, diverse source… Expand