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In this work we treat the problem of secure outsourcing of sequence comparisons by a client to remote servers. The sequence comparison problem, given two strings λ and µ of respective lengths n and m, consists of finding a minimum-cost sequence of insertions, deletions, and substitutions (also called an edit script) that transform λ into µ. In our framework… (More)
Several solutions have been developed to provide data-intensive applications with the highest possible data rates. Such solutions tried to utilize the available network resources through parallel I/O and TCP/IP tuning in order to achieve a better data throughput. The focus was on achieving the highest possible data rate while other performance enhancements… (More)
Recently, large bio-projects dealing with the release of different genomes have transpired. Most of these projects use next-generation sequencing platforms. As a consequence, many de novo assembly tools have evolved to assemble the reads generated by these platforms. Each tool has its own inherent advantages and disadvantages, which make the selection of an… (More)
Trust is more important than money and will ultimately determine cloud computing's success.