• Publications
  • Influence
The Ecoresponsive Genome of Daphnia pulex
The Daphnia genome reveals a multitude of genes and shows adaptation through gene family expansions. We describe the draft genome of the microcrustacean Daphnia pulex, which is only 200 megabases andExpand
  • 1,032
  • 62
  • PDF
MaizeGDB, the community database for maize genetics and genomics
TLDR
The Maize Genetics and Genomics Database (MaizeGDB) is a central repository for maize sequence, stock, phenotype, genotypic and karyotypic variation, and chromosomal mapping data. Expand
  • 182
  • 13
  • PDF
Comparative Plant Genomics Resources at PlantGDB1
PlantGDB (http://www.plantgdb.org/) is a database of plant molecular sequences. Expressed sequence tag (EST) sequences are assembled into contigs that represent tentative unique genes. EST contigsExpand
  • 102
  • 13
  • PDF
PlantGDB, plant genome database and analysis tools
TLDR
PlantGDB (http://www.plantgdb.org/) is a database of molecular sequence data for all plant species with significant sequencing efforts. Expand
  • 176
  • 10
  • PDF
Border Control—A Membrane-Linked Interactome of Arabidopsis
Degrees of Separation Proteins embedded in membranes represent an interesting point of communication between the cell and its environment, but their localization to membranes can make them difficultExpand
  • 149
  • 9
  • PDF
Genome-wide mutagenesis of Zea mays L. using RescueMu transposons
Derived from the maize Mu1 transposon, RescueMu provides strategies for maize gene discovery and mutant phenotypic analysis. 9.92 Mb of gene-enriched sequences next to RescueMu insertion sites wereExpand
  • 74
  • 6
  • PDF
GSV: a web-based genome synteny viewer for customized data
TLDR
We have developed the web-based Genome Synteny Viewer (GSV) that allows users to upload two data files for synteny visualization, the mandatory synteny file for specifying genomic positions of conserved regions and the optional genome annotation file. Expand
  • 43
  • 6
  • PDF
An Ergatis-based prokaryotic genome annotation web server
TLDR
We have developed a web-based prokaryotic genome annotation server, Integrative Services for Genomics Analysis (ISGA), which builds upon the Ergatis workflow system, integrates other dynamic analysis tools and provides intuitive web interfaces for biologists to customize and execute their own annotation pipelines. Expand
  • 105
  • 4
GeneSeqer@PlantGDB: Gene structure prediction in plant genomes.
The GeneSeqer@PlantGDB Web server (http://www.plantgdb.org/cgi-bin/GeneSeqer.cgi) provides a gene structure prediction tool tailored for applications to plant genomic sequences. Predictions are basedExpand
  • 53
  • 3
ESTPiper – a web-based analysis pipeline for expressed sequence tags
BackgroundEST sequencing projects are increasing in scale and scope as the genome sequencing technologies migrate from core sequencing centers to individual research laboratories. Effectively,Expand
  • 20
  • 3
  • PDF
...
1
2
3
4
5
...