SUMMARY
SimBoolNet is an open source Cytoscape plugin that simulates the dynamics of signaling transduction using Boolean networks. Given a user-specified level of stimulation to signal receptors,â€¦ (More)

We prove that for an action of a finite group G on a systolic complex X there exists a Gâ€“invariant subcomplex of X of diameter 5. For 7â€“systolic locally finite complexes we prove there is a fixedâ€¦ (More)

Cellular response to external stimuli requires propagation of corresponding signals through molecular signaling pathways. However, signaling pathways are not isolated information highways, but ratherâ€¦ (More)

We prove that if a group acts properly and cocompactly on a systolic complex, in whose 1-skeleton there is no isometrically embedded copy of the 1-skeleton of an equilaterally triangulated Euclideanâ€¦ (More)

A major aim of cancer genomics is to pinpoint which somatically mutated genes are involved in tumor initiation and progression. We introduce a new framework for uncovering cancer genes, differentialâ€¦ (More)

We establish that Gaussian thermostats are geodesic flows of special metric connections. We give sufficient conditions for hyperbolicity of geodesic flows of metric connections in terms of theirâ€¦ (More)