Nomi Harris

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SUMMARY Apollo is a genome annotation-editing tool with an easy to use graphical interface. It is a component of the GMOD project, with ongoing development driven by the community. Recent additions to the software include support for the generic feature format version 3 (GFF3), continuous transcriptome data, a full Chado database interface, integration with(More)
  • Nat A Winnacker, Ing H Niemann, G M Rubin, Emile Zola, Georg Stemmer, Andreas Kulicke +16 others
If you asked me what I came into this world to do, I will tell you: I came to live out loud. And also to Christine. i ii Acknowledgments Even though it (hopefully!) looks like one, this work has not been a straightforward effort. A number of " coincidences " lead to the rather unique possibility to pursue my own research ideas in two places at almost(More)
Computational biology comprises a wide range of technologies and approaches. Multiple technologies can be combined to create more powerful workflows if the individuals contributing the data or providing tools for its interpretation can find mutual understanding and consensus. Much conversation and joint investigation are required in order to identify and(More)
This report describes MM, a computer program that can model a variety of mechanical and uid systems. It addresses several issues: What is the appropriate input to the modeling process? How should the search for models be organized? What evidence can be brought to bear to constrain the task? MM takes as input both a description of the structure of the system(More)
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