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IMG: the integrated microbial genomes database and comparative analysis system
TLDR
The Integrated Microbial Genomes (IMG) system serves as a community resource for comparative analysis of publicly available genomes in a comprehensive integrated context. Expand
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IMG ER: a system for microbial genome annotation expert review and curation
TLDR
We have developed an Expert Review (ER) version of the Integrated Microbial Genomes (IMG) system, with the goal of supporting systematic and efficient revision of microbial genome annotations. Expand
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Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities
Enhanced biological phosphorus removal (EBPR) is one of the best-studied microbially mediated industrial processes because of its ecological and economic relevance. Despite this, it is not wellExpand
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The Wolbachia Genome of Brugia malayi: Endosymbiont Evolution within a Human Pathogenic Nematode
Complete genome DNA sequence and analysis is presented for Wolbachia, the obligate alpha-proteobacterial endosymbiont required for fertility and survival of the human filarial parasitic nematodeExpand
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Microbial species delineation using whole genome sequences
Increased sequencing of microbial genomes has revealed that prevailing prokaryotic species assignments can be inconsistent with whole genome information for a significant number of species. TheExpand
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Distinct lineage specification roles for NANOG, OCT4, and SOX2 in human embryonic stem cells.
Nanog, Oct4, and Sox2 are the core regulators of mouse (m)ESC pluripotency. Although their basic importance in human (h)ESCs has been demonstrated, the mechanistic functions are not well defined.Expand
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The integrated microbial genomes (IMG) system
TLDR
The integrated microbial genomes (IMG) system is a new data management and analysis platform for microbial genomes provided by the Joint Genome Institute (JGI). Expand
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IMG 4 version of the integrated microbial genomes comparative analysis system
TLDR
The Integrated Microbial Genomes (IMG) data warehouse integrates genomes from all three domains of life, as well as plasmids, viruses and genome fragments. Expand
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IMG/M 4 version of the integrated metagenome comparative analysis system
TLDR
IMG/M (http://img.jgi.doe.gov/m) provides comparative analysis of microbial community aggregate genomes (metagenomes) in the context of a comprehensive set of reference genomes from all three domains of life, as well as plasmids, viruses and genome fragments. Expand
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IMG/M: integrated genome and metagenome comparative data analysis system
TLDR
The Integrated Microbial Genomes with Microbiome Samples (IMG/M: https://img.jgi.doe.gov/m/) system contains annotated DNA and RNA sequence data of (i) archaeal, bacterial, eukaryotic and viral genomes from cultured organisms, (ii) single cell genomes (SCG) and genomes from metagenomes (GFM) from uncultured archaea, bacteria and viruses. Expand
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