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Inter‐subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1‐ATPase
- N. Numoto, Y. Hasegawa, K. Takeda, K. Miki
- Biology, Medicine
- EMBO reports
- 1 November 2009
V‐type ATPases (V‐ATPases) are categorized as rotary ATP synthase/ATPase complexes. The V‐ATPases are distinct from F‐ATPases in terms of their rotation scheme, architecture and subunit composition.… Expand
Structure of an extracellular giant hemoglobin of the gutless beard worm Oligobrachia mashikoi.
- N. Numoto, T. Nakagawa, A. Kita, Y. Sasayama, Y. Fukumori, K. Miki
- Chemistry, Medicine
- Proceedings of the National Academy of Sciences…
- 11 October 2005
Mouthless and gutless marine animals, pogonophorans and vestimentiferans, obtain their nutrition solely from their symbiotic chemoautotrophic sulfur-oxidizing bacteria. These animals have… Expand
Origin of asymmetry at the intersubunit interfaces of V1-ATPase from Thermus thermophilus.
- Y. Nagamatsu, K. Takeda, T. Kuranaga, N. Numoto, K. Miki
- Chemistry, Medicine
- Journal of molecular biology
- 9 August 2013
V-type ATPase (V-ATPase) is one of the rotary ATPase complexes that mediate energy conversion between the chemical energy of ATP and the ion gradient across the membrane through a rotary catalytic… Expand
Crystal structure of archaeal photolyase from Sulfolobus tokodaii with two FAD molecules: implication of a novel light-harvesting cofactor.
- M. Fujihashi, N. Numoto, +5 authors K. Miki
- Biology, Medicine
- Journal of molecular biology
- 28 November 2006
UV exposure of DNA molecules induces serious DNA lesions. The cyclobutane pyrimidine dimer (CPD) photolyase repairs CPD-type - lesions by using the energy of visible light. Two chromophores for… Expand
Structure of the C subunit of V-type ATPase from Thermus thermophilus at 1.85 A resolution.
- N. Numoto, A. Kita, K. Miki
- Biology, Medicine
- Acta crystallographica. Section D, Biological…
- 1 May 2004
The V-type H(+)-ATPases are similar to the F-type ATP synthases in their structure and functional mechanism. They hydrolyze ATP coupled with proton translocation across a membrane, but in some… Expand
Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca2+-Driven Catalytic Cycle
A cutinase-type polyesterase from Saccharomonospora viridis AHK190 (Cut190) has been shown to degrade the inner block of polyethylene terephthalate. A unique feature of Cut190 is that its function… Expand
Crystal structure of the Co‐chaperonin Cpn10 from Thermus thermophilus HB8
Introduction. Chaperonins are ubiquitous proteins that control the folding of other proteins denatured by various stresses, such as heat shock. They consist of two types of proteins, cpn60 (60 kDa)… Expand
Structure of the partially unliganded met state of 400 kDa hemoglobin: Insights into ligand‐induced structural changes of giant hemoglobins
- N. Numoto, T. Nakagawa, A. Kita, Y. Sasayama, Y. Fukumori, K. Miki
- Biology, Medicine
- Proteins
- 1 October 2008
Recent crystallographic studies have revealed the structures of some invertebrate extracellular giant hemoglobins of 3,600 kDa or 400 kDa and their common quaternary structure of dodecameric… Expand
Structural basis for the heterotropic and homotropic interactions of invertebrate giant hemoglobin.
- N. Numoto, T. Nakagawa, A. Kita, Y. Sasayama, Y. Fukumori, K. Miki
- Chemistry, Medicine
- Biochemistry
- 4 October 2008
The oxygen binding properties of extracellular giant hemoglobins (Hbs) in some annelids exhibit features significantly different from those of vertebrate tetrameric Hbs. Annelid giant Hbs show… Expand
Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca2+-Driven Catalytic Cycle.
A cutinase-type polyesterase from Saccharomonospora viridis AHK190 (Cut190) has been shown to degrade the inner block of polyethylene terephthalate. A unique feature of Cut190 is that its function… Expand