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Mitochondrial DNA Variability in the Czech Population, with Application to the Ethnic History of Slavs
- B. Malyarchuk, T. Vaněček, M. Perkova, M. Derenko, M. Sip
- Biology, Medicine
- Human biology
- 1 December 2006
ABSTRACT Mitochondrial DNA (mtDNA) variability was studied in a sample of 179 individuals representing the Czech population of Western Bohemia. Sequencing of two hypervariable segments, HVS I and HVS… Expand
Oligonucleotide-based microarray: a new improvement in microarray detection of plant viruses.
- D. Bystřická, O. Lenz, I. Mraz, L. Piherová, S. Kmoch, M. Sip
- Biology, Medicine
- Journal of virological methods
- 1 September 2005
Microarrays are one of the new emerging methods in plant virology currently being developed by various laboratories. In this study, a new approach is described on the detection of plant viruses using… Expand
Mitochondrial DNA D-loop hypervariable regions: Czech population data
In order to identify polymorphic sites and to find out their frequencies and the frequency of haplotypes, the complete D-loop of mitochondrial DNA (mtDNA) from 93 unrelated Czech Caucasians was… Expand
Variability in Coat Protein Sequence Homology Among American and European Sources of Strawberry Vein Banding Virus.
Strawberry vein banding virus (SVBV) isolates from North America, Czech Republic, Norway, and Germany were collected and their variability was determined by dot blot hybridization and confirmed by… Expand
DNA microarray: parallel detection of potato viruses.
DNA microarray assay has become a useful tool for gene expression studies. Less frequent is its application to detection of viruses or diagnostics of virus diseases. Here we show design of a… Expand
Influence of a charged graphene surface on the orientation and conformation of covalently attached oligonucleotides: a molecular dynamics study.
- M. Kabelác, O. Kroutil, M. Předota, F. Lankaš, M. Sip
- Chemistry, Medicine
- Physical chemistry chemical physics : PCCP
- 29 February 2012
Molecular dynamics (MD) simulations of single-stranded (ss) and double-stranded (ds) oligonucleotides anchored via an aliphatic linker to a graphene surface were performed in order to investigate the… Expand
Detection of strawberry vein banding virus by polymerase chain reaction and dot blot hybridization.
Strawberry vein banding virus (SVBV) is one of seventeen members of the family Caulimoviridae. Natural infection with the virus is known in Fragaria species only. Infections caused by SVBV are often… Expand
Diagnosis of strawberry vein banding virus by a non-radioactive probe.
A non-radioactive digoxigenin-labelled cDNA probe was prepared from genomic DNA of American isolate No. 45058 of strawberry vein banding virus (SVBV). Five different air-dried SVBV-containing… Expand
Pentacoordinated transition states of cisplatin hydrolysis— ab initio study
Abstract Pentacoordinated platinum transition state (TS) geometries for both steps of cisplatin S N 2 hydrolysis reaction were fully optimized using Moller–Plesset second order perturbation (MP2) and… Expand
The trans effect in square‐planar platinum(II) complexes—A density functional study
The mechanism of substitution water exchange reactions in square planar trans‐Pt[(NH3)2T(H2O)]n+ complexes is studied in terms of σ‐donation and π‐backdonation whose relative strengths are quantified by changes of electron occupations of 5d platinum atomic orbitals. Expand