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CREx: inferring genomic rearrangements based on common intervals
TLDR
The web-based program CREx supports the user in finding parsimonious rearrangement scenarios given a phylogenetic hypothesis and is based on common intervals, which reflect genes that appear consecutively in several of the input gene orders.
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Phylogenetic Analyses of Small Subunit Ribosomal RNA Coding Regions Reveal a Monophyletic Lineage of Euglyphid Testate Amoebae (Order Euglyphida)
TLDR
The order Euglyphida forms a monophyletic lineage with the sarcomonads as sister group and the genus Euglypha isMonadofilosa (Testaceafilosia and Sarcomonadea) appear monophylettic.
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Phylogenetic relationships within the class Spirotrichea (Ciliophora) inferred from small subunit rRNA gene sequences.
TLDR
The molecular data support the morphological and ontogenetic evidence that the pattern of 18 frontal-ventral-transversal cirri evolved in the stemline of the Oxytrichidae and was modified several times independently.
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Phylogeny of the Stichotrichia (Ciliophora; Spirotrichea) Reconstructed with Nuclear Small Subunit rRNA Gene Sequences: Discrepancies and Accordances with Morphological Data
TLDR
The nuclear small subunit rRNA genes of seven species of the Stichotrichia, representatives of the families Oxytrichidae, Amphisiellidae, and Pseudourostylidae, were analysed and resulted in a poor resolution of the phylogenetic relationships.
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Phylogenetic Analysis of Complete Small Subunit Ribosomal RNA Coding Region of Myxidium lieberkuehni: Evidence that Myxozoa are Metazoa and Related to the Bilateria
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Selective neuronal staining in tardigrades and onychophorans provides insights into the evolution of segmental ganglia in panarthropods
TLDR
The organisation of the nervous system in three tardigrade species using antisera directed against tyrosinated and acetylated tubulin, the amine transmitter serotonin, and the invertebrate neuropeptides FMRFamide, allatostatin and perisulfakinin shows correspondences that support the homology of segmental ganglia in tardsigrades and arthropods.
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Analysis of the complete mitochondrial DNA sequence of the brachiopod Terebratulina retusa places Brachiopoda within the protostomes
TLDR
Sequence analyses of mitochondrial protein coding genes support a close relationship of the brachiopod with molluscs and annelids, thus supporting the clade Lophotrochozoa.
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Effects of long‐term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
TLDR
Changes in pH, moisture and organic nutrients availability caused shifts in the composition of eukaryotic microbial communities at multiple trophic levels, and a co‐occurrence based network analysis revealed complex potential interaction patterns between OTUs from different troPHic levels.
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Evolution of mitochondrial gene orders in echinoderms.
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Mitochondrial genome evolution in Ophiuroidea, Echinoidea, and Holothuroidea: insights in phylogenetic relationships of Echinodermata.
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