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Towards a unified paradigm for sequence‐based identification of fungi
The nuclear ribosomal internal transcribed spacer (ITS) region is the formal fungal barcode and in most cases the marker of choice for the exploration of fungal diversity in environmental samples.Expand
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FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
Fungi typically live in highly diverse communities composed of multiple ecological guilds. Although high-throughput sequencing has greatly increased the ability to quantify the diversity of fungi inExpand
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UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi.
Identification of ectomycorrhizal (ECM) fungi is often achieved through comparisons of ribosomal DNA internal transcribed spacer (ITS) sequences with accessioned sequences deposited in publicExpand
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Global diversity and geography of soil fungi
Introduction The kingdom Fungi is one of the most diverse groups of organisms on Earth, and they are integral ecosystem agents that govern soil carbon cycling, plant nutrition, and pathology. FungiExpand
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Ectomycorrhizal lifestyle in fungi: global diversity, distribution, and evolution of phylogenetic lineages
The ectomycorrhizal (EcM) symbiosis involves a large number of plant and fungal taxa worldwide. During studies on EcM diversity, numerous misidentifications, and contradictory reports on EcM statusExpand
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Fungal community analysis by high-throughput sequencing of amplified markers – a user's guide
Novel high-throughput sequencing methods outperform earlier approaches in terms of resolution and magnitude. They enable identification and relative quantification of community members and offer newExpand
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The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
TLDR
We provide a web-based database and sequence management environment for the molecular identification of fungi. Expand
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Fine scale distribution of ectomycorrhizal fungi and roots across substrate layers including coarse woody debris in a mixed forest.
• Ectomycorrhizal (ECM) fungi are widespread plant root symbionts in boreal forests, but information is lacking on the fine scale distribution of roots and fungi in substrate patches of differentExpand
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Strong host preference of ectomycorrhizal fungi in a Tasmanian wet sclerophyll forest as revealed by DNA barcoding and taxon-specific primers.
Ectomycorrhizal (ECM) symbiosis is a widespread plant nutrition strategy in Australia, especially in semiarid regions. This study aims to determine the diversity, community structure and hostExpand
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