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Long-term agricultural fertilization alters arbuscular mycorrhizal fungal community composition and barley (Hordeum vulgare) mycorrhizal carbon and phosphorus exchange.
Agricultural fertilization significantly affects arbuscular mycorrhizal fungal (AMF) community composition. However, the functional implications of community shifts are unknown, limitingExpand
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Agricultural management practices influence AMF diversity and community composition with cascading effects on plant productivity
Understanding the effects of different agricultural practices on the mycorrhizal symbiosis is important for agricultural production and the sustainable use of soil. We investigated the compositionExpand
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Metagenomes from Coastal Marine Sediments Give Insights into the Ecological Role and Cellular Features of Loki- and Thorarchaeota
Microorganisms of the superphylum Asgard Archaea are considered to be the closest living prokaryotic relatives of eukaryotes (including plants and animals) and thus promise to give insights into theExpand
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Agricultural land use determines functional genetic diversity of soil microbial communities
Abstract Microbial communities play a major role in the degradation of soil organic matter (SOM) in soils. Despite its significance, the functional diversity of the highly diverse microbialExpand
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Captured metagenomics: large-scale targeting of genes based on ‘sequence capture’ reveals functional diversity in soils
Microbial enzyme diversity is a key to understand many ecosystem processes. Whole metagenome sequencing (WMG) obtains information on functional genes, but it is costly and inefficient due to largeExpand
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Erratum to: MetCap: A bioinformatics probe design pipeline for large-scale targeted metagenomics
TLDR
We are presenting a web-based tool called MetCap that circumvents the limitations of amplicon sequencing of multiple genes by designing probes that are suitable for large-scale targeted metagenomics sequencing studies. Expand
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MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics
TLDR
MetCap provides a novel approach to target thousands of genes and genomic regions that could be used in targeted metagenomics studies. Expand
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Metagenome assembled-genomes reveal similar functional profiles of CPR/Patescibacteria phyla in soils.
Soil microbiome is one of the most heterogeneous biological systems. State-of-the-art molecular approaches such as those based on single-amplified genomes (SAGs) and metagenome assembled-genomesExpand
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New Insights into the Microbial Profiles of Infected Root Canals in Traumatized Teeth
Traumatic dental injuries in young individuals are often exposed to the invasion of oral microorganisms that leads to pulp necrosis. Infective necrosis in permanent teeth not-fully-developed causesExpand
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Formate Utilization by the Crenarchaeon Desulfurococcus amylolyticus
Formate is one of the key compounds of the microbial carbon and/or energy metabolism. It owes a significant contribution to various anaerobic syntrophic associations, and may become one of the energyExpand
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