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Biological Pathway Exchange (BioPAX) is a standard language to represent biological pathways at the molecular and cellular level and to facilitate the exchange of pathway data. The rapid growth of the volume of pathway data has spurred the development of databases and computational tools to aid interpretation; however, use of these data is hampered by the(More)
BioPAX (Biological Pathway Exchange) is a standard language to represent biological pathways at the molecular and cellular level. Its major use is to facilitate the exchange of pathway data (http://www.biopax.org). Pathway data captures our understanding of biological processes, but its rapid growth necessitates development of databases and computational(More)
An instruction systolic array is a programmable systolic array. Instructions and mask bits are pumped through the array as well as data. It offers cost-benefit advantages over systolic arrays because one array can be used for multiple applications. This paper describes a method of translating systolic array programs into programs for instruction systolic(More)
Two-dimensional convolution is a fundamental, computationally-intensive operation used in image processing, and an operation particularly difficult to implement on systolic arrays. We present two new systolic solutions, both developed with the assistance of a systolic array design tool called SAGE. One of the solutions is developed first as a 3D systolic(More)
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