Jose Nelson Perez Castillo

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This article is about the assessment of several tools for k-mer counting, with the purpose to create a reference framework for bioinformatics researchers to identify computational requirements, parallelizing, advantages, disadvantages, and bottlenecks of each of the algorithms proposed in the tools. The k-mer counters evaluated in this article were(More)
Functional annotation represents a means to investigate and classify genes and transcripts according to their function within a given organism. The annotation process for unknown sequences involves the use and integration of various tools that deal with the following tasks: local-alignment search for comparing unknown sequences with known-sequence databases(More)
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