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16 This specification describes enhancements to the SOAP messaging to provide quality of 17 protection through message integrity, and single message authentication. These 18 mechanisms can be used to accommodate a wide variety of security models and 19 encryption technologies. 20 This specification also provides a general-purpose mechanism for associating(More)
SUMMARY A new online framework for the accurate and integrative prediction of transcription factor binding sites (TFBSs) in prokaryotes was developed. The system consists of three interconnected modules: (1) The PRODORIC database as a comprehensive data source and extensive collection of TFBSs with corresponding position weight matrices. (2) The pattern(More)
This Tutorial presents the latest developments in the area of Java and Relational Databases. The material is based on the SQLJ consortium effort whose goal is to leverage Java technology for SQL processing. The SQLJ effort is driven by major industry vendors such as Oracle, Sybase, Tandem, JavaSoft, IBM, Informix and others. The SQLJ specifications describe(More)
Data processing applications must often execute collections of related transactions. We propose a model for structuring and coordinating these multi-transaction activities. The model includes mechanisms for communication between transactions, for compensating transactions after an activity has failed, for dynamic creation and binding of activities, and for(More)
Colonization of the intestinal tract and dissemination into deeper tissues by the enteric pathogen Yersinia pseudotuberculosis demands expression of a special set of virulence factors important for the initiation and the persistence of the infection. In this study we demonstrate that many virulence-associated functions are coregulated with the carbohydrate(More)
Permission to copy and display the "Business Process Execution Language for Web Services Specification, version 1.1 dated May 5, 2003" (hereafter "the BPEL4WS Specification"), in any medium without fee or royalty is hereby granted, provided that you include the following on ALL copies of the BPEL4WS Specification, or portions thereof, that you make: 1. A(More)
PRODORIC is a database that provides annotated information on the regulation of gene expression in prokaryotes. It integrates a large compilation of gene regulatory data including transcription factor binding sites, promoter structures and gene expression patterns. The whole dataset is manually curated and relies on published results extracted from the(More)