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UNLABELLED Protein-protein interaction (PPI) detection is one of the central goals of functional genomics and systems biology. Knowledge about the nature of PPIs can help fill the widening gap between sequence information and functional annotations. Although experimental methods have produced valuable PPI data, they also suffer from significant limitations.(More)
Single Nucleotide Polymorphisms (SNPs) provide valuable information on human evolutionary history and may lead us to identify genetic variants responsible for human complex diseases. Unfortunately, molecular haplotyping methods are costly, laborious, and time consuming; therefore, algorithms for constructing full haplotype patterns from small available data(More)
Protein interactions play an important role in the discovery of protein functions and pathways in biological processes. This is especially true in case of the diseases caused by the loss of specific protein-protein interactions in the organism. The accuracy of experimental results in finding protein-protein interactions, however, is rather dubious and high(More)
BACKGROUND Prostate cancer, a serious genetic disease, has known as the first widespread cancer in men, but the molecular changes required for the cancer progression has not fully understood. Availability of high-throughput gene expression data has led to the development of various computational methods, for identification of the critical genes, have(More)
Reconstruction of gene co-expression networks is a powerful tool for better understanding of gene function, biological processes, and complex disease mechanisms. In essence, co-expression network analysis has been widely used for understanding which genes are highly co-expressed through special biological processes or differentially expressed in various(More)
This paper describes the effect of applying the appropriate methods for estimating some empirical coefficients in the Advection-Dispersion Equation (ADE) on the accurate suspended sediment concentration predictions. In this study three existing empirical sediment discharge equations, four particles fall velocity formulas and three dispersion equations used(More)
Proteins have vital roles in the living cells. The protein function is almost completely dependent on protein structure. The prediction of relative solvent accessibility gives helpful information for the prediction of tertiary structure of a protein. In recent years several relative solvent accessibility (RSA) prediction methods including those that(More)
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