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Continuum molecular electrostatics, salt effects, and counterion binding—A review of the Poisson–Boltzmann theory and its modifications
- P. Grochowski, J. Trylska
- ChemistryBiopolymers
- 1 February 2008
TLDR
Gated binding of ligands to HIV-1 protease: Brownian dynamics simulations in a coarse-grained model.
- Chia-En Chang, T. Shen, J. Trylska, V. Tozzini, J. Mccammon
- BiologyBiophysical journal
- 1 June 2006
TLDR
Binding Pathways of Ligands to HIV‐1 Protease: Coarse‐grained and Atomistic Simulations
- Chia-En Chang, J. Trylska, V. Tozzini, J. Andrew McCammon
- Biology, ChemistryChemical biology & drug design
- 1 January 2007
TLDR
Thermodynamic linkage between the binding of protons and inhibitors to HIV‐1 protease
- J. Trylska, J. Antosiewicz, M. Gilson
- ChemistryProtein science : a publication of the Protein…
- 31 December 2008
TLDR
Secondary structures of native and pathogenic huntingtin N-terminal fragments.
- M. Długosz, J. Trylska
- Biology, ChemistryThe journal of physical chemistry. B
- 21 September 2011
TLDR
Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study.
- Karine Voltz, J. Trylska, N. Calimet, Jeremy C. Smith, J. Langowski
- Biology, ChemistryBiophysical journal
- 22 February 2012
Brownian dynamics simulations on CPU and GPU with BD_BOX
- M. Długosz, P. Zieliński, J. Trylska
- Computer ScienceJ. Comput. Chem.
- 1 September 2011
TLDR
Flap opening dynamics in HIV-1 protease explored with a coarse-grained model.
- V. Tozzini, J. Trylska, Chia-En Chang, J. Mccammon
- PhysicsJournal of structural biology
- 1 March 2007
Dependency Map of Proteins in the Small Ribosomal Subunit
- K. Hamacher, J. Trylska, J. Mccammon
- Biology, ChemistryPLoS Comput. Biol.
- 4 January 2006
TLDR
Enzymatic activity of human immunodeficiency virus type 1 protease in crowded solutions
- K. Maximova, Jakub Wojtczak, J. Trylska
- Biology, ChemistryEuropean Biophysics Journal
- 28 August 2019
TLDR
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