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Introduction to computational molecular biology
Preface 1. Basic Concepts of Molecular Biology 2. Strings, Graphs, and Algorithms 3. Sequence Comparison and Database Search 4. Fragment Assembly of DNA 5. Physical Mapping of DNA 6. PhylogeneticExpand
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Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
The genus Xanthomonas is a diverse and economically important group of bacterial phytopathogens, belonging to the γ-subdivision of the Proteobacteria. Xanthomonas axonopodis pv. citri (Xac) causesExpand
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The genome of woodland strawberry (Fragaria vesca)
The woodland strawberry, Fragaria vesca (2n = 2x = 14), is a versatile experimental plant system. This diminutive herbaceous perennial has a small genome (240 Mb), is amenable to geneticExpand
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The Genome of the Natural Genetic Engineer Agrobacterium tumefaciens C58
The 5.67-megabase genome of the plant pathogen Agrobacterium tumefaciens C58 consists of a circular chromosome, a linear chromosome, and two plasmids. Extensive orthology and nucleotide colinearityExpand
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The genome sequence of the plant pathogen Xylella fastidiosa
Xylella fastidiosa is a fastidious, xylem-limited bacterium that causes a range of economically important plant diseases. Here we report the complete genome sequence of X. fastidiosa clone 9a5c,Expand
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Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis.
Leptospira species colonize a significant proportion of rodent populations worldwide and produce life-threatening infections in accidental hosts, including humans. Complete genome sequencing ofExpand
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Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology
Protein secretion plays a central role in modulating the interactions of bacteria with their environments. This is particularly the case when symbiotic bacteria (whether pathogenic, commensal orExpand
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Genome features of Leptospira interrogans serovar Copenhageni.
We report novel features of the genome sequence of Leptospira interrogans serovar Copenhageni, a highly invasive spirochete. Leptospira species colonize a significant proportion of rodent populationsExpand
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Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.
Xylella fastidiosa is a xylem-dwelling, insect-transmitted, gamma-proteobacterium that causes diseases in many plants, including grapevine, citrus, periwinkle, almond, oleander, and coffee. X.Expand
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Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes
BackgroundThe metabolic capacity for nitrogen fixation is known to be present in several prokaryotic species scattered across taxonomic groups. Experimental detection of nitrogen fixation in microbesExpand
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