J. Rogers

Publications211
h-index36
Citations9,287
Highly Influential Citations640
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A higher-level phylogenetic classification of the Fungi.
A comprehensive phylogenetic classification of the kingdom Fungi is proposed, with reference to recent molecular phylogenetic analyses, and with input from diverse members of the fungal taxonomic…
Reconstructing the early evolution of Fungi using a six-gene phylogeny
TLDR
It is indicated that there may have been at least four independent losses of the flagellum in the kingdom Fungi, and the enigmatic microsporidia seem to be derived from an endoparasitic chytrid ancestor similar to Rozella allomycis, on the earliest diverging branch of the fungal phylogenetic tree.
A Revision of the Genus Hypoxylon
An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny.
TLDR
The phylogenetic relationship among 106 taxa from 12 orders out of 16 in the Sordariomycetes was investigated based on four nuclear loci, and most of the orders are recognized as monophyletic groups.
Molecular phylogeny of Hypoxylon and closely related genera.
Phylogenetic relationships were inferred among several xylariaceous genera with Nodulisporium or nodulisporium-like anamorphs based on the analyses of beta-tubulin and alpha-actin sequences. One…
Prodromus to class loculoascomycetes
Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits.
TLDR
This study provides a phylogenetic synthesis for the Fungi and a framework for future phylogenetic studies on fungi and the impact of this newly discovered phylogenetic structure on supraordinal classifications is discussed.
The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits.
TLDR
A 6-gene, 420-species maximum-likelihood phylogeny of Ascomycota, the largest phylum of Fungi, and a phylogenetic informativeness analysis of all 6 genes and a series of ancestral character state reconstructions support a terrestrial, saprobic ecology as ancestral are presented.
Phylogenetic status of Xylaria subgenus Pseudoxylaria among taxa of the subfamily Xylarioideae (Xylariaceae) and phylogeny of the taxa involved in the subfamily.
TLDR
Xylaria appears to be a paraphyletic genus, with most of the 11 genera submerged within it, and apparently diverged from Xylaria and the other genera early.
Diatrypaceae in the Pacific Northwest.
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