• Publications
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Optimal description of a protein structure in terms of multiple groups undergoing TLS motion.
  • J. Painter, E. Merritt
  • Medicine, Chemistry
  • Acta crystallographica. Section D, Biological…
  • 1 April 2006
A single protein crystal structure contains information about dynamic properties of the protein as well as providing a static view of one three-dimensional conformation. This additional informationExpand
  • 1,186
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TLSMD web server for the generation of multi-group TLS models
The TLSMD web server extracts information about dynamic properties of a protein based on information derived from a single-crystal structure. It does so by analyzing the spatial distribution ofExpand
  • 703
  • 13
  • PDF
A molecular viewer for the analysis of TLS rigid-body motion in macromolecules.
TLS (translation/libration/screw) models describe rigid-body vibrational motions of arbitrary objects. A single-group TLS model can be used to approximate the vibration of an entire protein moleculeExpand
  • 86
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HingeMaster: Normal mode hinge prediction approach and integration of complementary predictors
Protein motion is often the link between structure and function and a substantial fraction of proteins move through a domain hinge bending mechanism. Predicting the location of the hinge from aExpand
  • 43
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mmLib Python toolkit for manipulating annotated structural models of biological macromolecules
The Python Macromolecular Library (mmLib) is a software toolkit and library of routines for the analysis and manipulation of macromolecular structural models, implemented in the Python programmingExpand
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Reinforcement Learning for the Adaptive Scheduling of Educational Activities
We introduce reinforcement scheduling (RS), a novel RL algorithm for assigning course materials based on a learner’s starting knowledge state and history of interaction with course materials. Expand
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"Page and Stage": The Actor's Perspective
As actors who toured the country in the spring of 2009 performing in The Iliad: Book One with the Aquila Theatre Company as part of the "Page and Stage" program, we here discuss some of theExpand
Developing Reliability in Hydraulic Stimulation Operations
In modern hydraulic stimulation operations, a key focus for operators and service providers is operational efficiency. While there are many factors that can affect operational efficiency, along withExpand
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A system for isolating portions of a wellhead from fluid pressure
A wellhead system comprising a wellhead assembly comprising a tubing head 224 having a first inner surface and a top surface; a tubular member comprising a second inner cylindrical surface and aExpand
Searching for the helical-gradient force on chiral molecules
We investigate a force that has been predicted to discriminate molecules by their chirality when they are in the presence of an optical field with a polarization-helicity gradient. We investigateExpand